Dechloromonas aromatica: Daro_0003
Help
Entry
Daro_0003 CDS
T00259
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dar
Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dar03032
]
Daro_0003
03400 DNA repair and recombination proteins [BR:
dar03400
]
Daro_0003
Enzymes [BR:
dar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Daro_0003
DNA replication proteins [BR:
dar03032
]
Prokaryotic type
DNA Topoisomerases
Daro_0003
DNA repair and recombination proteins [BR:
dar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Daro_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
FLYWCH_N
Motif
Other DBs
NCBI-ProteinID:
AAZ44762
UniProt:
Q47K69
LinkDB
All DBs
Position
2938..5442
Genome browser
AA seq
834 aa
AA seq
DB search
MSEENTPMSSPQDAGSPAYGESSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDN
SIDEALAGHCNDIIVTIHTDNSISVIDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGG
KFNQNSYKVSGGLHGVGVSCVNALSKFLRLTIRRDGKKHFMEFCRGVPVDRSIEVRNGLE
VSPMKILGDTEKRGTEVHFLADEEIFGHVEFHYEILAKRLRELSFLNNGVSIKLVDQRTG
KEELFAFAGGVQSFVEYINRTKSVLHPSIFYSAGEAKVGQGAADTGIIIGVEVAMQWNDS
YQEQVLCFTNNIPQSDGGTHLTGLRAAMTRVINKYIDENEIAKKAKVDIAGDDMREGLAC
VLSVKMPDPKFASQTKMKLVSSEARAAVEEVVAQKLADFLLERPVDAKMICGKIVEASRA
REAARRAREMTRRKGVLDGVGLPGKLADCQEKDPALCEIYIVEGDSAGGSAKQGRDRKFQ
AILPLRGKVLNVEKARFDKLISSEQIVTLITALGTGIGKDDFNVEKLRYHRIIIMTDADV
DGAHIRTLLLTLLYRQMPELIDRGYVYIAQPPLYKVKHGKTERYLKDDQEYHQFLLNMAL
DEAVLTPRADAEGITGPALEGLARSWLATEAVIDRLSHLINPEVLQSIVRHNIAIDLSSE
ENARASAERIAGFIPAGTRMVPKFDDIQERWILRVERMHHGNLKVGLIDEDLLLSGDFTQ
LRRTAETLADMFGAGATMARGEKKQVVTNFADAMKWLLNEVERGIAKQRYKGLGEMNPEQ
LWETTMDPKVRRLLRVQIDDAIAADEIFTTLMGEDVEPRRAFIETNALSARVDI
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacacgccaatgagcagcccgcaagacgccggatcaccggcctacggt
gaatccagtatccagatcctcgaaggcctggaggctgtccgcaagcgtccgggcatgtac
attggcgatacctcggacggtaccggtttgcaccatctggtcttcgaagtggtggataac
tccatcgacgaagcgctggctgggcattgcaacgacatcattgtcaccatccataccgac
aactcgatcagcgtcatcgacaacggccggggtatcccgaccggcgtcaagatggacgac
aagcacgagccgaagcgctcggcggctgaaattgcgctgaccgagttgcacgctggcggc
aagttcaaccagaactcatacaaggtatccggtggtctgcacggggtcggtgtttcctgc
gtcaatgcgctgtccaagttcctgcgcctgaccattcgccgcgatggcaagaagcacttc
atggaattctgccgtggcgtgccggttgaccgcagtattgaagtccgcaatggacttgaa
gtgtcgccgatgaagattcttggcgataccgagaagcgcggcaccgaagtgcacttcctg
gccgacgaggaaatctttggccacgttgaattccactacgaaattctcgccaagcgcttg
cgcgaactctccttcctgaacaacggcgtcagcatcaagctggtcgaccagcgtaccggc
aaggaagaactctttgcttttgctggtggtgtacagagctttgtcgagtacatcaaccgt
accaaatcggtccttcacccgagcattttctactcggccggcgaggccaaggtgggtcag
ggcgctgccgacactggcatcatcatcggcgttgaagtggcgatgcagtggaacgactcc
tatcaggaacaggtgctctgcttcaccaacaacattccgcagtcggacggtggtacccac
ctgaccggcctgcgcgccgcgatgacccgcgtcatcaacaaatacatcgacgaaaacgag
atcgccaagaaggccaaggtcgatatcgctggcgacgacatgcgcgaaggcctggcctgc
gtgctatcggtcaagatgcccgatccgaaattcgcgtcgcagaccaagatgaagctggtt
tcctccgaagcccgtgctgcagtcgaggaagtcgtcgcccagaaacttgccgatttcctg
cttgagcgaccggttgacgccaagatgatctgcggcaagatcgtcgaagcctcgcgggct
cgcgaagccgcccgtcgtgcgcgtgaaatgacgcgccgcaagggggttctcgacggcgtc
ggcctgcccggcaagctggccgattgtcaggaaaaagacccggcgctgtgcgaaatctac
atcgtcgagggtgactccgccggcggctccgccaagcagggtcgtgaccgcaagttccag
gccatcctgccgctgcgcggcaaggtgctcaacgtcgagaaagcgcgtttcgacaagctg
atctcgtccgaacagattgtcacgctgatcaccgcgctcggcaccggtattggcaaggac
gacttcaacgtcgaaaaattgcgttaccaccgcatcatcatcatgactgacgcggacgta
gacggcgcccacatccgcaccctgctactgacgctgctctaccgccagatgcccgagttg
atcgaccgcggttacgtctatatcgcccagccgccgctctacaaggtcaagcacggcaag
accgagcggtacctgaaggacgatcaggaatatcaccagttcctgctcaacatggcgctc
gacgaagcggtgctgacgccgcgtgccgacgccgaaggcatcaccggcccggccctggaa
ggtctggcccgctcgtggctggccactgaggccgtaatcgaccgcctgtcccacctgatc
aatccggaagtgctgcagtccatcgttcgccacaacatcgcgattgacctgtccagcgaa
gaaaatgcgcgtgccagtgccgagcggatcgctgggttcatcccggccggaacccgcatg
gtgccgaagtttgacgatatccaggagcgctggatactgcgcgtcgagcgcatgcaccac
ggcaacctgaaggtcggcctgatcgatgaggatttgctgctctccggtgacttcacgcag
ttgcgccgcacggccgaaacactggctgatatgttcggcgctggagccaccatggcccgt
ggcgagaagaaacaggttgtgaccaacttcgccgacgccatgaagtggctgctcaatgaa
gtcgaacgcggcattgccaagcagcgctacaaaggtctgggcgaaatgaaccccgagcag
ttgtgggaaacgaccatggacccgaaggttcgccgcctgttgcgcgtgcagattgacgac
gccattgcggctgacgaaattttcacgacgctgatgggtgaggatgtcgagccgcgtcgg
gcattcatcgaaacgaacgccttgagtgctcgggtcgatatttga
DBGET
integrated database retrieval system
