Desulforapulum autotrophicum: HRM2_13230
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Entry
HRM2_13230 CDS
T00861
Symbol
ddlB1
Name
(GenBank) DdlB1
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat00470
D-Amino acid metabolism
dat00550
Peptidoglycan biosynthesis
dat01100
Metabolic pathways
dat01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HRM2_13230 (ddlB1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HRM2_13230 (ddlB1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HRM2_13230 (ddlB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dat01011
]
HRM2_13230 (ddlB1)
Enzymes [BR:
dat01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HRM2_13230 (ddlB1)
Peptidoglycan biosynthesis and degradation proteins [BR:
dat01011
]
Precursor biosynthesis
Amino acid ligase
HRM2_13230 (ddlB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATPgrasp_ST
TTL
Motif
Other DBs
NCBI-ProteinID:
ACN14434
UniProt:
C0Q8U4
LinkDB
All DBs
Position
complement(1509982..1511001)
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AA seq
339 aa
AA seq
DB search
MNKTIAIVHNRINNGSLPDEIDVLVQVDAVSQALSGLGYEPIAVPCDLDLNALKQTLTAM
KPAVVFNLVESLDGHGRLIQVVPALVEALGYACTGCPAEAIYLTSHKVMAKERMRSLGLP
TADWINPVPLDIPWQGAADLGPTGTWIIKSLWEHASLGLELENLVKGNSREIAALLPDRA
SALGGACFAEQFIQGREFNLSLMDTDKGVRVLPPAEIIFKGFDHDQPKIVGYRAKWVQDA
AEYHNTPRSFDFSPKDAPLIANLERLSLGCWHGFGLRGYARVDFRVDDLGNPFILEVNTN
PCISPDAGFCAALEQAGISHGQGIHMILKQSSQPIPAMG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccattgccattgtacacaacaggataaacaacggctctttacccgatgaa
attgatgtcctcgtacaggttgatgccgtatctcaggccctctcaggcctgggatatgaa
cccattgctgtaccctgcgaccttgaccttaacgccctgaagcagaccctgacagccatg
aaaccagctgttgtgtttaaccttgtggaatccctggacggtcatggacggctgattcag
gtggttccagcccttgtggaagctttggggtatgcctgtaccggatgcccggctgaggcg
atttatctcacctcccacaaggtcatggccaaagaacgaatgcgcagtcttggactgccc
actgccgactggataaatcccgtgccccttgacattccctggcagggggcagcagacctt
ggaccgaccggcacctggatcatcaaatccctttgggagcatgcctccctggggcttgaa
ctggagaacctggtgaagggcaacagccgtgaaattgcagcccttctgccagacagggcc
agcgcccttggtggggcatgttttgccgaacaattcatacagggaagggagttcaacctc
tcgttgatggatacggacaagggcgtgagggtgcttccccctgctgaaatcatattcaag
gggtttgaccacgaccagccaaaaattgtaggataccgggccaagtgggtccaggatgcg
gctgaatatcacaacaccccaagaagctttgacttttcgcccaaggatgcaccccttatt
gcaaaccttgaacgtctatcccttgggtgctggcacggctttggcctcaggggatacgcc
cgggtggatttcagggtggacgaccttggcaatccctttatacttgaggtgaacaccaac
ccctgcatatcaccggatgcgggattctgcgcagcccttgaacaggccggaatctcccat
gggcaaggtatccatatgatattaaaacaaagctcccagccaatcccggccatgggatga
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