Desulforapulum autotrophicum: HRM2_13240
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Entry
HRM2_13240 CDS
T00861
Symbol
ddlB2
Name
(GenBank) DdlB2
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat00470
D-Amino acid metabolism
dat00550
Peptidoglycan biosynthesis
dat01100
Metabolic pathways
dat01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HRM2_13240 (ddlB2)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HRM2_13240 (ddlB2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HRM2_13240 (ddlB2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dat01011
]
HRM2_13240 (ddlB2)
Enzymes [BR:
dat01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HRM2_13240 (ddlB2)
Peptidoglycan biosynthesis and degradation proteins [BR:
dat01011
]
Precursor biosynthesis
Amino acid ligase
HRM2_13240 (ddlB2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
GARS_A
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ACN14435
UniProt:
C0Q8U5
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All DBs
Position
complement(1510998..1511996)
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AA seq
332 aa
AA seq
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MIIGITYDLRQDYLDMGYTELETAEFDSVETIEAIETTLQGLGHETRRIGNAIRLTERLV
QGERWDLVFNIAEGLHGIGREAQIPAILDLYNIPYTFSDPMVMAVTLHKGMTKHIIRDAG
LATADFKVANSARDAWNLPFDPPFFVKPVAEGTGMGITAKSLVKNALDLPGVCQELVEQF
HQPVLIEEFLTGREFTVGIVGTGTRAQVMGTMEIIVISSKKDEVYSFENKEGWKSKVQYL
PLSPGTDPLIQAVEDLALSAWKVLGCRDGGRIDIRCDAAGRPSFIEVNPLAGLRPEYSDL
PIVCQFFGTSYVQLIELILESAMERVPVLETA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcggaatcacctatgacctgcgccaggattatctggacatgggatacacagag
cttgaaacggcggagtttgactcggtcgaaaccattgaagccattgaaaccacccttcag
ggtctgggccatgaaacccggcgtatcggtaacgccatcagactcacggaacgacttgtc
cagggtgaacgatgggaccttgtgtttaacattgccgaagggctccatggcattggccgg
gaagcacagatccctgccatccttgacctttacaacattccctacaccttttctgacccc
atggtcatggctgtgacccttcacaagggaatgaccaagcacattatccgggatgcaggg
cttgccacggctgatttcaaggtggcaaactcggcccgggatgcctggaacctcccgttt
gatccaccgttttttgtcaaacccgtggcagaaggaacgggaatgggcataacggctaaa
tccctagttaaaaatgcactggaccttcccggggtgtgccaggaattggttgagcagttc
caccaacccgtgctcattgaagaatttctcaccggtcgtgagttcaccgtgggcattgtg
ggaacgggtaccagggcccaggtcatgggaaccatggagattatcgtgatttccagcaaa
aaagatgaggtgtactcgtttgaaaacaaggaagggtggaaatccaaggttcagtatctg
cccctcagccctgggacagatcccctgatccaggccgttgaagacctggccctttctgcc
tggaaagtgctgggatgcagggatggaggacgaattgacatccggtgcgacgccgctgga
cgccccagctttatcgaggtgaaccccctggcaggacttcggcctgaatattcagacctt
cccattgtatgccaattttttgggacatcctatgtccagctgattgaactgatcctggaa
tcagccatggaaagggtacctgtcctggagacagcatga
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