Desulforapulum autotrophicum: HRM2_18280
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Entry
HRM2_18280 CDS
T00861
Symbol
msbA1
Name
(GenBank) MsbA1
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HRM2_18280 (msbA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dat02000
]
HRM2_18280 (msbA1)
Enzymes [BR:
dat01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HRM2_18280 (msbA1)
Transporters [BR:
dat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HRM2_18280 (msbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
nSTAND1
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACN14930
UniProt:
C0QBR8
LinkDB
All DBs
Position
2079444..2081153
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AA seq
569 aa
AA seq
DB search
MSLVVGYWKPLALAMGCMVIVAAATSISAYLVKPMLDDIFVNRDRSRLLLLPGAAVLIFF
SKGAATYGQQYWMNHVGQQIIKTLRNMLYNRIMDLPLAFFHNEKTGTLMSRITNDVNIVK
GMVSTAVAGLLRDLFTVIGLVGVIFYMDWKLAVGAFLVLPAAFYPIILFGRRVRRFSTGR
QEAMADLNVFLHETFAGSKIVKTFVREDYEKERFHGKSEELFRLEMRSVVAKSLSSPVME
FLGGVGIAFIIWFGGSRVISGASSTGTFFSFLTAVMLLYAPAKKLATLNNTIQEGMAAVT
RIFEIIDRESEIKDVQDPLLLEGTEVGVAFENVSFAYQTDGDPVLSHIDLKVNPGEVLAL
VGMSGGGKTSLVNLIPRFYDVTAGTLRLNGMDVKNIGIKSLREKISIVTQEPVLFNDTVA
SNIRYGNLEASDEDVVLAAQKAFAHDFIMGFPEGYDTVIGELGSRLSGGEKQRLCIARAL
IKDAPILILDEATSALDSEAEQVVQQALANLIKGRTTFVIAHRLSTVDHAHRIVVVENGQ
IIEQGTHEELMAQGGKYYSLRTMQQIDNP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactcgttgtcggctattggaaaccccttgcccttgccatggggtgcatggtgatt
gtggctgcggctacctcaatctcggcctacctggttaagcccatgctggatgatattttt
gtgaaccgcgaccggtcccgcttattgttgcttcccggtgcagctgtcctgatctttttt
tctaagggtgcagccacctatgggcagcagtactggatgaaccatgtgggacagcagatc
atcaaaacccttcgaaacatgctttataaccgtatcatggatcttcccctggcctttttt
cacaatgaaaaaacaggcaccctcatgtccaggatcaccaatgatgtcaacattgtcaaa
ggcatggtttcaacggcagtggcaggacttttgcgtgatcttttcacggtgatcggcctt
gtgggggtgattttttacatggactggaaacttgccgtgggggcctttcttgttctgcct
gcggcattttatccgattatactttttgggcgcagggtgcggcggttcagcaccggacgc
caggaggccatggcagatctcaatgtgtttctccatgaaacctttgcaggcagcaagatt
gtcaaaacctttgtcagggaagattatgagaaagagcgcttccatggtaaatcggaagaa
ctgtttcgcctggagatgaggtcggtggttgccaaatccctttcctctcctgtcatggag
tttcttggcggggtgggtatcgcctttatcatctggtttggcgggtccagggttatttcc
ggggcatcctccaccggaacttttttttcctttctgacggcggtgatgttgctctatgcc
cctgcaaaaaaacttgcgacattgaataacaccatccaggagggcatggccgctgttacc
cggatttttgaaatcattgatcgtgaatctgaaataaaagatgtgcaggatcccctttta
ctggaagggacagaggtgggtgtggcttttgaaaatgtgtcgtttgcctaccagaccgat
ggggaccccgtgttgagtcacattgacttgaaggtgaatcccggggaagtccttgccctg
gtgggcatgagtgggggaggtaaaacttcccttgtaaacctcattcccaggttttacgat
gtaaccgccggaacccttcgtctgaatggaatggatgtgaaaaatattggcatcaagtcc
ctcagggaaaaaatttccattgtgacccaggagccggtactttttaacgacaccgtcgcc
agcaatatccggtatggcaatcttgaggcttcagacgaggacgttgtcctggccgcccaa
aaagcctttgcccatgatttcatcatggggtttccagaagggtatgacacggtcatcgga
gagcttggcagcaggctgtccggtggagaaaaacagcgattatgcattgccagggctttg
atcaaggatgcccccatcctcatccttgatgaggctacctctgcccttgattccgaagcg
gaacaggtggtgcagcaggccctggccaacctcatcaaaggacgaaccacctttgtcatt
gcccatcggctttcaaccgtggaccatgcccaccgcattgtggttgtagaaaacgggcag
attatagagcagggcacccatgaagaactcatggcccagggtggtaaatattattccctt
cgcaccatgcagcagattgataacccttag
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