Desulforapulum autotrophicum: HRM2_49230
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Entry
HRM2_49230 CDS
T00861
Symbol
oppD
Name
(GenBank) OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dat
Desulforapulum autotrophicum
Pathway
dat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRM2_49230 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dat02000
]
HRM2_49230 (oppD)
Transporters [BR:
dat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HRM2_49230 (oppD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ATP-synt_ab
DUF87
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACN17971
UniProt:
C0QIM7
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All DBs
Position
5560651..5561610
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AA seq
319 aa
AA seq
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MSHLLEVQDLKVKFALRFGDLTAIDGISFTLDKGERLGIVGESGAGKSVTGFAIINLLSK
PGFIAGGRILFNGDEISAFPEKKMRSIRGNRISMIFQDPMMTLNPVFTIGTQMVETLKAH
QKITTAEAKKVALEKLKKVHIPSPEKRLSQYPHEFSGGMRQRIIIAISLLTDPSIIIADE
PTTALDVTIQAEIMDLLQELCLTDDMGLILITHDLGVVSQVTEKIAVMYAGKIIEKGATA
TVVNSPSHPYTQGLIKSLPGVLKPGETLYQIPGMMPNLTEIPPGCAFNPRCPIKQDICLR
EVPPLKQTEKGIMAACHLI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacctcctggaagtacaggatctaaaagtaaaatttgccctgagattcggtgat
ctcacggccattgacggcataagtttcaccctggataagggggaaagactcggcattgtg
ggtgaaagcggggctggaaaatccgtcacaggctttgccatcatcaacctgttgagcaag
cccggattcatcgccgggggaagaatcctctttaacggcgatgaaatcagcgcatttcca
gaaaagaaaatgagatccatccggggcaaccggatcagcatgattttccaggatcccatg
atgaccctcaacccggtctttaccattggcactcagatggtggaaaccctgaaggcccat
caaaagatcaccacggccgaggctaaaaaggtcgccctggaaaagctaaaaaaggttcac
atcccttcgcctgaaaaaagactctcccagtatccccacgagttttccgggggtatgcgc
cagcggattatcattgccatatccctgttgaccgacccttcgatcatcattgctgacgaa
cccacaacggccctggacgtaaccatccaggccgaaatcatggaccttctccaggagctt
tgcctcacggatgacatggggctgatcctcatcacccacgaccttggggtggtctcccag
gtaacggaaaaaatcgccgtcatgtatgccgggaaaataatcgaaaagggcgctaccgcc
accgttgtcaattcgccttcccacccctacacccagggactgatcaaatccctgccaggg
gtgttgaagcctggagaaaccctttaccagatacccggcatgatgcccaacctcacggaa
atcccccctggatgcgcattcaacccccgttgccccatcaaacaggatatctgtctcagg
gaggtcccccctttgaagcaaaccgaaaaaggcataatggctgcatgccatttgatttag
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