Drosophila arizonae: 108616481
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Entry
108616481 CDS
T05886
Name
(RefSeq) uncharacterized protein LOC108616481 isoform X1
KO
K13191
RNA-binding protein 16
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daz03021
]
108616481
03041 Spliceosome [BR:
daz03041
]
108616481
Transcription machinery [BR:
daz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108616481
Spliceosome [BR:
daz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108616481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Macoilin
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108616481
NCBI-ProteinID:
XP_017867181
LinkDB
All DBs
Position
5
AA seq
1668 aa
AA seq
DB search
METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQYGTEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN
NVFKSEVIQPIFDLADPNHPIYHQMPPIGAGNLNASSGPSGSSGVLNLSDISSSNAANGL
NASGMSNMDMSGAVDDKMGGAMPDLSISHEKCSSSSRRHMEQHYMKRQQQQQQQHQHNMP
SSNSASGSKSRFDSGGLSKSHHHNKYGKGSSSHELDYDLREIIDDEDGDMLMGDDHHCMG
DDTPPGSSNLLDNNNLKQLLNDPNVLRQLQTLQNFQKFKQQEENQKHRYQEQDALQQHLQ
NVLKGTGGLPPGVGMGMSHNDVMDMNKDVEFISEQQPIEVINLDGADSRSPTPDRDRYKR
SRRSSRSRSPRSRGGGGGGGGGGNGNDRDRGSRRRSSRSRSRSPRSSRRRGSRDRDRMER
STRDKERDREHERERRKKGLPEIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIV
SIDQIVPRGCAFIVMNRRQDAHKAMQALKNHKLQGRAITISWAAGKGVKSKEWKDFWDLD
LGVTYVPWNKLSPDTDFDSLEEGGMFDEDTMPSWMKQKINQAKNVKDVKPTALTGEMPNV
PSVAPPNLLFGIDTTQPPPVAPPQHGGPGAPPPALMGMVPGQFQMAPPLGAPPPQRMLGP
MGPLNHPLGSMAMPPNMVPGMPPPMMMPPNMMPPGFPTMGGPPPHPMGLPPGAQFPPPGA
VPPPMATIPAPAGSGTGNVSDDQMDIEMELEDAPSQSAPTSSQQQAPNFSQPPPIFAGGA
TQPNSVDVAAAVAGNDLFQRDRTRGPSGAGSRWGGRDDIAEASERWRNENGGGGPPPLSG
AFNEARARLNLNSMEHGGMQRPEFLGGLEFDNRQGGGPRGMGPGPRGGNHNGGNGGGDFF
QPNMNPNQNRFNQPTSLMQMRIPPPVAFNQRMGGPGAGNGVGPMFMRNQGGGGPGGRQQG
PGFFNPRNPFNDNQRGRGGGGGGGGSGGSGGGRGMGGGGGRGGRWSDDEEDGGNNFKRRG
GGGPGGPGNRFRGERDGDDRRGGNGRSGRGSQRSEERERGPNNNNRRGSRDDSNRQSISS
TDENALQGKQSSSEPDDMKNKPVAAPSVNNVEKSAAVDTEEDWDRELQEYDARMEAQQAA
EAAAAAEAAATAAPAAAATAASNSNNNNSNNNNNNDASSVSSSTSSSSSNAAAAAISHIA
SKVVSKICETCIKLEADVKKYRAEISHMKQIENELRQKLDVNLTSKSSLQAKQKECDELE
KRIQELTNARHADMLSLQAVERRLNEERRQKQSLDAQLANEKKARKAAEEKAARPECSAQ
CKQRRQQMEEELKRVRNELKQTEGAMQVAVDHGRKFEQEYHMLELKVQNRESTQADAEML
MNALATMQEKNTTLEKNLSAETRVKLDLFSALGVAKRRLEIADSQRRSKEDEVIDLKAKI
AQLLAVMPDTLCLNTGPHGSGSMLRMNDTPPLQSGGPGPSSPMLSLGVAQDYQQHQHQQH
QQHQQHQQHQQLQQQHQQHQQQQHQQHQQHQLQQQQQVVPVSQQQQQQQMVPVSVAAALH
VVAGNVVNGGGGGGGLSTLDPNASVYTPKTGNMMVVPPVNMNPNGADA
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggagacggtcgtcgctttcaataatgagctctccgggctctatgatagccgaccgccc
atatcgaaggctaaaatggccgccatcacaaagtcggcaatgcgtgcaattaaattctac
aagcatgttgtgcagagtgttgaaaagtttatactcaaatgcaagccggagtacaaagtg
ccgggcctgtatgtcatagactcaatagtgcgacaatcgcgtcatcaatatggcaccgag
aaggatgtgtttgcgccccgcttccagcgtaatctaaccgaaacgtttgcaaatctgttt
cgttgcgcgcccgaggacaagagtcgcatcattcgcgtgctgaacctttggcaaaagaac
aatgtgttcaaatcggaagtaatacagccaatatttgatttggctgatccaaaccatccg
atttaccatcaaatgccaccaatcggcgccggcaatctcaacgcgagctctggaccaagt
ggcagcagcggcgttctaaatctctcggatatttccagtagcaatgctgccaatggtttg
aatgcctcgggaatgagcaatatggatatgagtggtgctgtcgacgataaaatgggtggt
gcaatgccggatctgtcgataagccacgagaagtgctcaagctctagtcgacgtcacatg
gaacagcattatatgaagcgtcaacaacagcagcagcagcagcatcaacataatatgcca
tccagcaattcggcatctggttcgaagagccgtttcgatagtgggggactaagcaagtcg
catcatcacaacaaatatggcaagggtagcagctcccatgagctggactatgatctgcgt
gagataatcgatgacgaggatggggacatgctgatgggcgacgatcatcattgtatgggc
gatgatacgccgcccggctcttccaatttgctagataacaataatttaaagcagctgctc
aacgatcccaatgtcttacgccaactgcaaacgctgcaaaactttcaaaagtttaagcaa
caagaggagaatcaaaagcatcgctaccaggagcaggatgccttgcagcagcatttgcag
aatgttctcaagggcacaggtggcttgccgccgggcgtcggcatgggcatgagccacaat
gatgtgatggacatgaacaaggatgttgaattcatatcggaacagcaaccgattgaggtt
atcaatctggatggtgccgattcccgtagtccgacgcccgatcgtgaccgttacaagcgc
agtcgacgcagcagccgcagtagatcgccccgtagtcgtggcggcggcggtggtgggggt
ggtggtggcaatggaaacgatcgtgatcggggaagtcgccgtcgcagctcacgttcgcgc
agccgttcgccacgttccagccgcaggcgcggatcgcgcgatcgtgaccgcatggagcgc
agcacgcgcgacaaggagcgggatcgcgaacatgaacgtgagcgacgcaagaagggcctg
cccgagattaagaaggagcatctaagtgtgtgcagtaccacgctgtgggtgggtcatctc
tccaagctggtgtaccaggaggagctctcggatacttttggtgaatatggcgatatcgtg
agcatcgatcagattgtgcccagaggttgtgcattcatcgtgatgaatcgtcgccaagac
gcacacaaggctatgcaggcgcttaagaatcacaagcttcaaggtcgtgccattaccata
tcttgggcagctgggaagggtgtgaagagcaaggaatggaaggatttctgggatcttgat
ctcggcgtcacatatgtgccgtggaacaagctgagccccgacacggacttcgacagtctc
gaggagggcggcatgttcgacgaggacaccatgcccagctggatgaagcaaaaaatcaat
caggcgaaaaatgtcaaggatgtcaagccgacagccctaaccggagaaatgcccaatgtg
ccgtctgtggcgccgccaaacttgctctttgggattgacaccacacagccaccgccagtg
gctccgccacagcatggcggacctggtgcacctccgcccgcgctgatgggtatggtgcct
ggccagttccagatggcgcctccattgggcgcaccaccgccgcagcgcatgttgggtccc
atggggccgctgaaccatccgttgggcagcatggctatgcctccgaatatggtgcccggc
atgccgccgccaatgatgatgccgcctaatatgatgccacccggttttccgaccatgggc
ggcccacctccacatcctatgggactgccgccgggcgcacagtttcccccgccgggagca
gtgccgccgcccatggccacaattccagcacccgcgggctctggcactggcaatgtgagc
gacgaccaaatggacatcgaaatggagcttgaggatgcaccatcgcaatcggcacctacg
tcctcacaacagcaagcacctaacttcagccaaccgccgccgatcttcgcaggtggcgcc
acacaaccgaacagtgtggatgtggccgcagcggttgctggaaatgatctgttccaaagg
gatcgcacacgtggtcctagcggcgccggttctcgctggggcggccgcgacgacattgct
gaggcttcggagcgctggaggaatgagaacggaggcggtggaccgccgccgctaagcgga
gccttcaacgaggcacgagcgcgtctcaatctcaatagcatggaacatggtggaatgcaa
cgtccagaattcttgggtggtttagaatttgataatcgtcaaggcggtggaccgcgtggc
atgggtcctggccccaggggtggcaatcataatggcggcaatggcggaggtgacttcttc
cagcccaatatgaatcccaatcagaatcggttcaatcagccaacgagtctgatgcagatg
cgaataccgccgccggtggcgtttaatcagcgcatgggaggaccgggtgcaggcaatgga
gtgggtcccatgtttatgcgtaatcaaggtggcggtggaccaggcggcaggcagcaagga
ccaggtttcttcaatccgcgcaatccgtttaacgataatcaacgtggtcgtggcggtggc
ggaggtggtggcggcagcggtggtagtggtggtggtcgtggcatgggcggtggcggaggt
cgcggtggccgatggagcgatgatgaggaagacggcggcaacaacttcaaacgccgtgga
ggcggtggcccaggtggcccgggcaatcgattccgtggcgaacgcgatggcgatgataga
cgcggcggcaatggacgtagtggacgtggcagccagcgcagcgaagagcgtgaacgtgga
cccaacaataataacagacgtggctcacgcgacgacagtaatcgccagtcgataagctcc
acggatgagaacgcattgcagggcaaacagtcttcgtcggagccggatgatatgaagaat
aagccggtggcagcgccatccgtgaacaatgtagaaaaatcagctgctgtagataccgag
gaggactgggatagagagctgcaggagtatgatgctagaatggaagcgcaacaagcagct
gaagctgcagcggctgcagaagcagcagcaactgctgcacctgctgccgcggcaactgct
gccagtaacagtaacaacaacaacagtaacaacaacaataacaatgatgccagctccgtt
tcgtcgtcgaccagctcgtcgtcgagcaatgccgccgctgccgccatctcgcacattgcc
agcaaagttgtatcgaagatatgcgaaacatgtattaagctggaggcagatgttaagaaa
tatcgtgccgaaattagccacatgaagcaaatcgagaacgagctgcgccagaaactggac
gtcaatctgaccagtaaatccagtttgcaggccaagcagaaggagtgcgacgagctggag
aagcgcatacaggagctgaccaatgcacgccatgccgacatgctcagtttgcaggctgtg
gaacgtcgcctaaacgaggaacgccgccaaaagcaatctcttgacgcccagctggccaat
gagaaaaaggcacgcaaagctgccgaggagaaggcagcacggccagagtgcagcgcccag
tgcaagcagcgtcgccagcaaatggaggaagagttgaaacgcgtgcgcaacgagctcaag
cagaccgaaggcgccatgcaggtggccgtggatcatggccgcaaattcgagcaggagtat
cacatgctggaactgaaggtgcaaaatcgcgagtccacgcaagcggatgctgagatgctg
atgaatgcgctggctaccatgcaggagaagaacacaaccctggagaagaatctatccgca
gagacgagagttaagctggacttgttctcggctctgggcgtggcaaagcgacggctagaa
atagctgacagtcaacgtcggtccaaggaggatgaggtcattgatctcaaggccaagata
gcccagctgctggctgtaatgccggacacgctgtgcctgaacacggggccgcatggtagc
ggaagcatgctgcgcatgaacgatacacctccgctacaatcgggcggaccgggcccgtcc
tcgcccatgctcagcctgggcgtcgcgcaagattatcaacagcatcaacatcagcaacat
caacagcaccagcagcaccagcagcatcagcagctacagcagcagcaccaacaacaccag
caacagcagcatcaacagcaccagcagcatcaactccagcaacagcaacaggttgtgccc
gtttcacagcagcagcagcaacagcaaatggtgccggtcagtgtggctgcagcgctgcat
gtggtggccggcaatgtggtcaacggtggtggtggcggcggtggtctctcgacgctggat
ccaaatgccagcgtctatacgcccaaaaccggcaacatgatggtggtgccgccggtgaat
atgaatcccaatggtgcggatgcctga
DBGET
integrated database retrieval system
