Dermochelys coriacea (leatherback sea turtle): 119843346
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Entry
119843346 CDS
T09064
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
119843346
NCBI-ProteinID:
XP_038228549
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Position
1:198826663..198936901
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AA seq
739 aa
AA seq
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MAVLLAPVQLLAVAVTVYLELVRSIQGGVYYGIKQLPPQIPQYQALGQQVPHMPLGKEGT
PMQHMGKEVPHMQYGKEYPHLPQYMKEIPQLPMLGKEMVPKKDKEMPLASLRGEQGPPGE
PGPRGPPGAPGLPGHGVPGAKGKPGPQGYPGIGKPGMPGMPGKPGAMGLPGSRGEMGPKG
EIGPMGIPGPQGPPGPPGLPGIGKPGGQGLPGQAGIKGEPGMKGPPGLPGLQGPKGEKGI
GIPGLPGLKGPPGVPGPPGPVGLPGIGKPGMIGFPGPQGPIGKPGIPGERGPQGLLGAPG
IQGPPGLPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMG
GFPGALGPKGEKGHMGPPGMGGPPGEPGQPGLPGIMGPPGAVGFPGPKGEGGPVGPQGPI
GPKGEPGLQGFPGKPGFPGEVGPPGLRGLPGPIGPKGEAGHKGLPGLPGVPGQLGPKGEP
GIPGDQGHQGPSGIPGIAGPSGPIGPPGLPGPKGEPGIPGPPGFPGVGKPGVSGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGLPIIIPPTPPAIGQYLPELGPGIDGVKTPPGYMGKK
GKNGGTVYEMPAFTAELTTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGIYYFAY
HIHCKGASVWVALYKNNEPLMYTYDEYKKGFLDQASGSTVIQLMPGDKVYIQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgttagcccctgtgcagctgctggcagtggctgtaacagtttacctagag
ctagtgagatccattcaagggggcgtctattatgggatcaagcagctaccaccccaaatc
ccacaatatcaggcccttggacaacaagtacctcacatgccactgggcaaagaaggcaca
ccaatgcagcacatgggcaaggaggtgccacacatgcaatatggaaaagaataccctcac
ctgcctcagtacatgaaagaaatcccacagctgcctatgctcggcaaagagatggtgcca
aaaaaagataaagaaatgccattagccagtttgagaggtgagcaaggtcccccaggtgag
cctggaccaagagggccaccaggggccccaggattaccaggtcatggagtgccaggagcc
aaaggaaaaccaggtccacaaggatatccaggaataggcaaaccaggtatgcctggaatg
cctggaaaaccaggagcaatggggctccctgggtcaagaggtgagatgggaccaaaggga
gagattgggcctatgggaataccagggccacaaggaccaccaggacctcctggactgcct
ggaataggaaaaccaggtggtcaaggattaccaggacaagcaggaataaagggtgaacca
ggaatgaaaggaccaccaggactcccggggcttcaagggcctaaaggagaaaaaggcatt
gggattccaggtctaccagggttaaaaggtccacctggagtacctggccctccaggtcca
gttggactcccagggataggcaaaccaggaatgattgggtttccaggaccccagggacct
ataggtaaaccaggaattccaggtgaacgagggcctcaaggtcttcttggggcacctggg
attcaaggtccacctggccttccaggtgttggaaaaccaggccaagatggaatcccaggc
cagcctggattcccaggcggaaaaggggaacaaggcttgccaggtttaccaggacccccg
ggcctaccagggattgggaaaccaggatttcctgggcctaaaggtgatcgtggcatgggt
ggtttccctggagcactgggacctaaaggtgagaaagggcacatgggtccccctggcatg
ggtgggccccccggggagccaggtcaaccaggattaccaggaataatggggccacccggt
gctgttggtttcccaggaccaaaaggagaaggtggacctgtagggcctcaaggtcctatt
ggtccaaaaggtgaacctggcctacaaggtttcccaggaaagccaggttttcctggggaa
gtaggacccccgggtcttagaggactacctggtccaatagggccaaagggagaagcaggt
cacaaaggtttgccaggcctgcctggtgttcctgggcaattaggacctaaaggggaacct
ggaatccccggtgatcaaggccatcaaggtccatctggaatcccaggtatcgcaggaccc
agcggcccaataggaccacctggacttccaggacctaaaggagaaccaggtatacctggt
ccaccaggctttccaggagtagggaaacctggtgtttcagggctgcaaggaccaccagga
aaacctggggcacttggtccacctggccagccgggtcttcagggtcctccagggcctcca
ggtccacctggtcttccaataatcatcccacccaccccaccggccattggacaatatttg
ccagagctggggcctggcattgatggagtgaagaccccacctggctatatgggcaagaaa
ggcaaaaatggtggcactgtctacgaaatgcctgcattcacggcagaactcaccacaccc
ttcccacgggttggggtgcctgtgaaatttgacaagcttctctacaatggcaggcagaac
tataacccacagactggtatcttcacctgtgagatccctgggatttactactttgcctac
cacattcactgtaaaggggccagcgtctgggtagctttgtacaagaacaatgagccactg
atgtacacatatgatgaatataaaaaaggcttcctggatcaagcttctggaagcaccgtc
attcagctgatgcctggagacaaagtttatattcaaatgccatctgaacaggcagcggga
ctctatgcggggcaatatgttcactcatctttctcaggatatttattgtatcctatgtaa
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