Dermochelys coriacea (leatherback sea turtle): 119861694
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Entry
119861694 CDS
T09064
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X3
KO
K06237
collagen type IV alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
dcc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119861694 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119861694 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119861694 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcc04147
]
119861694 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119861694 (COL4A3)
Exosome [BR:
dcc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119861694 (COL4A3)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119861694 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119861694
NCBI-ProteinID:
XP_038273060
LinkDB
All DBs
Position
9:complement(35292272..35399435)
Genome browser
AA seq
1674 aa
AA seq
DB search
MARGGCLGLLLLLLLFALLSSLRWPDGFAAAKSCVCKHKSHCYCDGMKGNKGEKGFPGAQ
GVPGQTGFHGPEGPPGPQGPTGFPGLIGLVGPKGERGMLGLPGFSGLPGLPGEPGNIGPS
GGPGIPGCDGPKGEQGFPGPPGPVGALGKPGIGGFKGDKGCPASGYDPGYDGRGDLGLPG
ISGRQGEPGPRGLQGIVGPQGPPGSSGVSGRMGLPGHKGVMGIKIIGTKGIQGDPGSTGP
PGPPGTVIVTLSGPDNMKDLKGEKGEKGSRGLPGPVGSLGFPGDFQSEKGDPGEPGPQGK
PGKDGTPGPHGFLGEKGEHGYAGLPGRAGTKGRKGDIGPPGFPDPTKYYDEVAGEKGDEG
YPGPPGLKGQPGIPGPRGPLGVKGRPGVSRPGINGPQGYPGLKGIKGERGQPGMNAVGSP
GLHGFPGRPGSVGSPGPPGQPGKVTFETHPPGVPGNPGCVGPPGLPGDSGVKGEEASPCN
QCSYIPGGPGLPGAPGQDGQEGVTGRQGIGGPKGSRGSPGGQGPSGPQGLTGFPGDQGLK
GQKGEPGYVYPEGQQGNRGDPGIRGNPGKKGSDGLHKKHGSKGSKGSKGERGLDGSKGDR
GLSGLPGNPGLPGEMGLTGPPGYGPQGVTGPKGAKGISGLPGLPGAIGPEGELSAVNPIP
GPPGPRGPEGLPGPPGAMGNVGSRGKRGDLGLPGSDGAPGFSGTLFPGDPGPKGNKGLRG
SKGSPGLPGKAGEPGLPGQSGYPGEKGDPGLIIPGQQGGLGSPGGDGFPGVKGDRGFPGL
PGFPGRNGADGPRGEPGCPGAPGEKGLPGKLGDCLIGPQGLPGSCGLTGQQGERGSVGSK
GDPSIPGLGVPGFPGEFGLPGLPGHQGDTGSPGLKGEPGRPGIPGAPGLRGERGIMGNLG
IPGPPGVFGHPGIPGNRGSPGLPGLKGRKGFLGPKGEPGDKGFPGPSETTGNTGDKGEPG
STGFPGRTGLKGETGDKGIQGSAGLDGTSRVSGLPGPKGFVGLPGFPGRQGLPGPPGDRG
DMGVPGSKGERGSRGLPGPSGAQGPPGLLGFPGDKGEPASSASGPPGKPGPKGDPGPPGE
MGRKGERGSPGQPGLVGEPGLAGNRGDCGKPGAPGPSECAGDTGTKGCKGVAGSRGTEGP
PGAIGAPGANGAVGERGNQGRDGLPGSPGEKGERGASRWQILGPQGISGPKGIKGDMGIP
GCPGPEGIKGLMGDPGPMGPPGLNGKPGFPGAPGITIPGQKGNRGLAGVNGRLGIPGSPG
SSGAPVYSIKGNKGVRGIDVIPGPPGLVGNIGPQGSTGVEGTPGNTGSRGEPGFTGLPGV
TGEKGNRGPPGPMGAAGPNGPKGRPGQPGAPRKATYIPGNQGPAGSPGSPGLPGDPGPRG
PPGLHGPQGVKGLPGHSGNPGILGPIGPKGDKGFQGQRGCPGLIGFPGIRGLPGSPGISI
AGPTRRGFIFTRHSQSPKIPSCPSGTAQIYSGYSLLFVQGNGQAHGQDLGTVGSCLQRFT
TMPFLFCNTNDVCNFASRNDYSYWLSTAAPMPEDMEPISSSALQPYISRCIVCEGPAVVI
AVHSQTTALPLCPQGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHG
RGTCNYYTNSYSFWLASLDPRRMFRKPLPQILKAGELENIISRCQVCMKRDRNF
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgggggctgcctggggctgctgctgctgctgctgctcttcgccctgctcagc
agcctgcgctggcccgacggcttcgccgccgccaagagttgtgtctgcaaacataaaagc
cactgctactgtgatggaatgaaaggtaataagggtgaaaaaggatttcctggtgctcaa
ggtgtacctggccagacaggtttccacggccctgagggacctccagggcctcagggaccc
acgggttttccagggctgataggtttagtcggacccaaaggtgaaaggggaatgctagga
ttgcctggtttttcaggtctcccaggtcttccaggtgaaccaggaaacattggtccttct
ggaggtccaggaattccaggatgcgatggcccaaagggtgaacaaggatttccggggcct
ccagggccagtaggtgctctgggcaaaccaggtattggtggcttcaaaggagataagggg
tgccctgcaagtggatatgacccaggatatgacggaaggggtgaccttggattaccagga
atatctggacgccaaggtgaaccaggtcctcgaggactccaaggtatagttggaccacaa
ggccctccgggatcttcaggtgtttcagggagaatgggacttccagggcataagggtgtc
atggggattaagatcataggaaccaaaggaatacagggtgaccctggatcaacaggaccc
cctgggccgccaggaacagttattgtgacattaagtggaccagataatatgaaggacttg
aaaggagagaaaggagagaaaggatcaaggggtctcccaggacctgttggctcattgggt
tttcctggagattttcaaagtgaaaaaggtgacccaggagagcctggcccgcagggtaaa
cctggaaaagatggtacccccggtccacatggctttctgggagagaagggtgaacatggc
tacgcaggattgcctggcagagcaggcactaaggggaggaaaggagacattggcccacca
ggatttcctgatcccacaaagtattatgatgaggtggctggtgaaaaaggagatgaagga
tatccaggacccccaggacttaaaggtcaacctggcatacctgggccaagaggtccccta
ggtgtgaaaggaagaccaggtgtatcgagacctggcataaatggtccacaaggatatcca
ggactgaaaggaattaagggagagagaggacagcctggcatgaatgctgtgggatctcca
ggacttcatgggtttccaggcagacctggctctgtaggatcaccaggtcctccaggacag
ccaggtaaagtaacatttgaaacgcacccaccaggagttccaggaaaccccggatgtgtg
ggacctccaggacttccaggagatagtggagtaaaaggtgaagaagcaagtccttgtaat
caatgcagttatataccaggaggacctggacttcctggtgctcctgggcaagacggccaa
gaaggagttactggtagacaaggaataggtggtcccaaaggatctcgaggttctccaggg
ggacaaggtccttcaggtcctcaaggacttacaggttttccaggagatcaaggacttaaa
ggacaaaaaggtgaaccaggatatgtgtatccagaagggcaacaaggaaacagaggagat
ccagggatcagaggaaatccagggaagaaaggttcagatggattgcacaaaaaacatggt
tcaaaaggctcaaaaggttctaaaggtgaacggggactggatggttcgaaaggggacaga
gggttatcaggacttcctggaaacccaggtcttcctggagaaatggggctcactggacca
ccaggatatggaccacaaggagtgacaggtcccaaaggtgctaagggaatatctggtttg
cctggattgcctggagcaattggtccagaaggagaacttagtgcagtaaatccaatacct
ggaccaccaggacctcgggggccagagggtttaccaggacccccaggagcaatgggtaat
gttggatctagaggaaaacgtggtgatttgggattacctgggtctgacggtgctccagga
ttttcagggactctatttcctggagatcctggtccaaaagggaataaaggtcttcgaggg
tctaaaggatcaccaggtttgccaggaaaggcaggagaaccaggcttgcctggacagtct
ggatacccaggagaaaagggagaccctggattaattattcctggccaacagggtggatta
ggttccccaggaggagacggctttccaggggtaaaaggtgacagaggatttccaggtcta
ccaggattcccaggacgtaatggtgctgatggaccaagaggagaacctggctgtcccgga
gctcccggagaaaagggacttccagggaagcttggtgattgtcttattggcccacaaggt
ctcccaggttcatgtggattaacaggccaacaaggagaaaggggttcagttggatcaaaa
ggagaccccagtattccaggcttgggtgtgccaggattccctggagagtttgggctgcct
gggttgccaggtcaccaaggagacacaggatcacctggtctgaagggagagcctggcaga
ccaggaataccaggtgcaccaggcctaagaggagaacgaggtataatgggcaatttagga
attcctggacctcctggtgtctttggacacccaggcattccaggaaacagaggttctcct
ggccttccaggattgaagggaagaaaggggtttttaggaccaaaaggtgaaccaggtgat
aaaggatttcctggaccatcagagaccacagggaatactggggataaaggagaaccagga
tcaacaggatttccaggaagaacaggtctgaaaggagaaacaggagataaaggtatacaa
ggatcagcagggcttgatgggacatcaagagtatcaggtctgccaggtcccaaaggattt
gtaggtctgccaggatttcctggaagacaaggattaccaggacctccaggagacagaggt
gatatgggagtgccaggttctaaaggggagagaggatctcgaggtttaccaggaccatct
ggtgcacaaggccctccaggccttcttggttttcctggtgataaaggagaaccagctagt
tcagcatctgggcctccaggaaaaccaggaccaaagggtgatccaggtcccccaggagaa
atgggaagaaaaggggaaagaggatcaccaggtcagccaggacttgtaggagaacctgga
ctagctggaaacaggggggattgtggaaaaccaggagctccagggccatctgaatgtgct
ggagatactggcactaaagggtgcaagggggtggcaggatcgagaggcactgaaggccct
ccaggtgcaataggagcccctggagccaatggagctgttggagaaagggggaatcaagga
cgggatggtcttcctggctccccaggggaaaagggagaacgaggtgcatccaggtggcag
attctaggtccacaaggtatttctggtcctaaaggaatcaaaggtgacatggggattcct
ggttgtccaggaccagaaggtattaaaggtctaatgggggatccaggaccaatgggacct
cctggattgaatggaaagccaggattcccaggtgcaccaggcataacaattcccggccag
aaaggaaatagaggtcttgccggagtgaatggaagactgggtattcctggtagtccagga
tcttctggagcccctgtatacagcataaaaggaaacaaaggtgttagaggtatagatgtc
ataccaggaccaccaggattggtaggcaatattggtcctcaaggttcaacaggagttgaa
ggcaccccaggcaatacaggctctagaggtgaacctggctttacaggacttccaggtgta
acaggagaaaagggtaatcgaggaccccctggaccaatgggtgcagcagggcctaacgga
ccaaagggccgccctggtcagcctggagcacctaggaaagcaacatatatcccaggaaat
caaggacctgctggatcacctggaagcccaggactaccaggagatccaggtcctcgaggg
ccaccaggattacatggacctcaaggtgtaaaaggtctaccaggccattctggaaatcca
ggcatacttggaccaattggtccaaaaggagacaaaggatttcaaggacaaagaggatgt
cctgggcttattggctttccaggaatacggggcctacctggttcccctggtatttccata
gctggtccaacaagaagaggcttcatctttacccggcacagccagtcaccaaagattcca
tcatgcccatctgggacagctcagatctacagtggttattctcttctctttgtacaagga
aatgggcaagcacatggccaagaccttgggacagttggtagctgcctgcagcgatttacc
accatgccatttttattctgcaacaccaatgatgtttgcaattttgcttctcgtaatgac
tattcatactggctgtcaactgcagcaccaatgccagaagacatggaaccaatctctagc
agcgccttacagccctatattagcagatgtattgtttgtgaaggaccagcagtggtaata
gcagttcacagccaaacaactgcacttcctttatgtcctcaaggctggatatctctgtgg
aagggtttttcctttgttatgtatacaagtgccggttcagaagcctctggccaagcattg
gcatcacctggatcctgcttggaagaattccgtgccattccattcatagaatgtcatggt
agagggacatgcaactactacacaaattcctacagcttctggctggcttcactagatcca
aggagaatgttcaggaagcctttaccacagattttaaaagccggggaattggaaaacatc
atcagccgctgtcaggtctgcatgaagagagacagaaatttttga
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