KEGG   Dermatophilus congolensis: SAMEA4475696_1756Help
Entry
SAMEA4475696_1756 CDS       T05038                                 

Definition
(GenBank) Putative DNA ligase-like protein Rv0938/MT0965
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
dco  Dermatophilus congolensis
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dco00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SAMEA4475696_1756
Enzymes [BR:dco01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAMEA4475696_1756
DNA repair and recombination proteins [BR:dco03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SAMEA4475696_1756
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1:1981368..1983314
Genome map
AA seq 648 aa AA seqDB search
MLATPTTGVPTSADWVHEVKWDGMRVLANVHHSHACLHTRNETDASTRFPEIVAALTAQS
TPADVLLDGEVVLFDEEGSPSFKKLQNRIFVKRADTAQRLAAIAPVTFMVFDLLRFNGRD
LIDEPWTVRRQLLETLTWNSDRVTVTPTFPDGEALLEATQEQGLEGIISKRIDAPYSPGK
RSKAWRKLPHRPTHSMVIGGWRPETGSDNRVGSLLVGLPESSAGEATRLCFLGRVGSGVA
GSAQETLMPLLREHAAKAPPFTTDLPDADAAGAHWVHPRLVIDVRALGGIPKPGYRLRQP
SFQGLRPDLTPADLVTETTKSATAKTNDTPTKASKKAQPLPQQPQTMSADVEDRRVPLTN
LEKVLYPDSGTTKSEIISYLVEASAALLPALAGRPVTRVRWPHGVQGPSFFEKNTPKNTP
EWVQTITLHSPGSRRESAQVTYPLVDDLSTLMWLGNLAALELHVPQWRIDSQGAPYAPDR
LVIDLDPGEPAGLTECARVALIVRDVLLEQGAGVIVPVTSGSKGIQLYTPVVGDPDDRDA
TRSRAQQLAKTLEQTHSDLVVATMTKAKRPGKILLDWSQNTRSKTTICPYSPRGKHRHVT
VAAPRTWDEIEAAATGAPAHALTQLGPREVLDRLEKLGNLFAPVHLWT
NT seq 1947 nt NT seq  +upstreamnt  +downstreamnt
atgctggcaacccccaccaccggtgtccctacaagtgctgattgggtacacgaagtgaag
tgggatggcatgcgcgtcctggcaaatgtgcatcacagccacgcctgccttcacacccgt
aacgaaacggatgccagcacccgattccccgaaatcgtggctgctttaactgctcagagc
acgccagcagatgtgctcctcgatggtgaagttgtgcttttcgatgaggaaggcagcccg
tcgttcaaaaaactacaaaaccgcattttcgtgaagagagcagatactgctcagcgcttg
gcggccatcgcaccggtcacttttatggtctttgatctgctccggttcaatggccgtgac
ctcatagacgagccgtggacggtgcggcgccaactgttggaaacactcacctggaacagt
gaccgagtcacagtgacacccacttttcctgatggtgaagccctcctagaagcaacccag
gagcaggggctggaggggatcatcagcaaacgtatcgatgccccctattcccccggtaaa
cgcagcaaagcatggcgtaaattgccccaccggcccacacattcgatggtgatcggcggt
tggcggcctgaaaccgggtcagacaaccgggtgggttctcttcttgttggcctaccggaa
agctcagctggtgaagctactcggttatgtttccttggccgtgtcggtagcggcgtggcc
gggtcggcacaagaaacgctgatgcctttactgcgcgaacacgccgcgaaagcacccccc
ttcactacagatcttcccgatgcagacgctgcgggggcgcactgggttcacccccgtctt
gttatcgatgttcgcgcgctgggcggtataccaaaaccgggctaccggctgcgtcaaccc
tcgttccagggactgcgtcctgacctgacccctgccgacctagtcaccgaaaccaccaaa
tcagctactgctaagaccaacgacacccccactaaggcaagcaaaaaagcccagcccctg
ccgcagcagccgcagactatgagcgccgatgtcgaggaccgccgtgttccgttgaccaat
cttgagaaggttctctaccccgattcaggcaccactaaatccgagatcatcagctacctg
gtggaggcttcggctgcgcttcttcccgcactggcaggacgtccagtcaccagggtgcgt
tggccacacggggtgcagggcccgtcttttttcgagaaaaacaccccgaagaacacgcct
gagtgggtgcagaccatcaccctccactcccccggttcgcgccgcgaatctgcccaggtc
acataccctctggttgacgacctgtccacgctgatgtggctgggaaacctcgctgcactc
gaactgcatgtaccgcagtggcgcatcgatagtcagggcgcgccgtacgccccggatcgt
ttagttattgaccttgaccccggggaacctgcagggcttactgaatgcgcacgcgttgcc
cttatcgtgcgtgatgtcctgctggagcagggggcgggcgtcatcgtcccggtaaccagc
ggcagcaaaggcatccagttgtacacccctgttgtcggtgatcctgatgatcgtgacgcc
actcgttctcgtgctcaacagttagcaaaaactcttgagcagacccactctgacttggtg
gttgcgacgatgacgaaggcgaaacggccaggcaagatcttgctcgactggagccaaaac
acacgctctaaaaccacgatttgtccttattcgccgcgtggtaaacatcgccatgtcacg
gtcgctgcgccgcgtacctgggatgagatagaggccgccgctaccggtgcaccggcgcat
gcgctgactcagcttggcccgcgcgaggtgctcgatcggttggagaagctcggcaacctg
ttcgcacctgtgcatctttggacctga

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