Daucus carota (carrot): 108195851
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Entry
108195851 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP214
KO
K14317
nuclear pore complex protein Nup214
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108195851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108195851
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108195851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108195851
NCBI-ProteinID:
XP_017218330
LinkDB
All DBs
Position
7:complement(8916488..8934005)
Genome browser
AA seq
1708 aa
AA seq
DB search
MVSIHKELVDEVEGDQIGSKNYRFCLIGEPISIVSDVDSDIFDLEKPPSQPLALSERFGL
LFVAHSTGFCVVKTKDAIDSSKKTEGRASVQELSVVDVPIGKVSILALSADSLTLAVSVD
ATAELHFFLVTALLNKEQKPSFSCSIEDSSVIKDIRWTKHVDKDYLVLLENGKLYHGCAQ
NDLKNVADNVDAVEWSMRGDFVAVARNKVISILSSSFDEKLSMSLSSKSTVGNPDVDSSI
KVDSIRWVRPDCIILGCFHLTDDGTEEGYLIQVITSQEGEIINPSSNPVVIQFNDVFLGF
MDDVVPSASGPHMFLSYLHQCQLAIIANRKNVDQHIVLFDWSRDDKKEAAMVEILNDAWI
PRIDCRGDGEDNIVIGLSIDKISQDKLAKINFGEETEVSPCCVLACLTVDGKLTFFHFAS
SIGNSTVQDANCISSEDEDVPLSIATEVQPFDVLSRIEEQKRGAEEAKESAIVYKPVHAY
IPQITSNDDYTSGKEMVKQVLDSQTINTQAQMTPVVNLNYDGKGQLSDLPEKQGEILRPS
ALMISNTDSSGDAVKDLKNNEPQTIAEVISNNDTPSEKLTIRISDLAVHSNVSKGFGGHG
ALQAQKGSTAIQDSSLKSISSGQFNISTPAEGRASMLPSSKIQMIQSNTKSTTHVQHLNN
LPSKDIGGSFNLKPYKNKPPAIVGNMESLPESRSPQVPSREKIALENSSNLADTTGRSRL
QSLKGLLSSGSNSSKQFLSVEEMTKELDLLLEHIEGLGGFGDASMSHQNNSVIALEDGIW
TLSERCGNWKGIMDKRLAKIQLILEKTVQALARKIYMEGIVKQATDSRYWDLWDHQRLSS
ELELKRRHLLELNQELTNQLIDLEKHFNSLELNKFSECADSGMNPRTMQSKHGSSRYVNS
LHSLQNTMSAQLAAAEHLSKCLSKQMAVLSIESPSIKKPNVKRDLFETIGIPYNDASYNS
PGSERKTSNTSSKQGRLSLSNSVAGKEQSWRKDSTRLKSSEPETARRRRDSLDRNWSSFN
PPKTTVKRMLLQDNRQRPKTGRSSFGIDQQLFNRELERSAYVATEQSTSSSATISNSFKG
KVTQNATPRSPEIATTLFKTELHNASQPRTNFSPLLSQSTGSSGSGLNKFAVDDLRSTKQ
SGFDLQQTPASSTRFPEKILPSSKKIDIVQNSTDKQIGLSGFASGNLKHEPLVTESLFSG
KSSKTQSSAALAFGSAPSLSYPGTIGNNPGQFTAASLSSSSYSSSISNSVRDLSPPHPKP
TSPGVSSTAVSSGSLTVNSSTSVLKAPPHGSTVSAAISQPSEKFVNSSAAISSNFSYKPP
STDVVKPSIEPDKKSEMLNSTSNSGLQIGRSDIKLEPPVTSKATSEVSTSSQSGSQFSFS
VSHSATKPDLEQPSPAILASASLSSLATANDQRIDNSAVIYTQEDEMEEEAPEESRSTEL
TLGSLGGFGIGTIPTPTTLKPNPFGSTFASTTSPANPPFSMTVPGGELFKPASFSFPSPQ
PSQPSQPSTFASFAGGISSGTSAQVPTGGFGHSAQTGAGQQALGSVLGSFGQSRQLGAGL
PGAGITSVGGSFGGFSGNQSAGGFAGNQPTGGFSSAVAGGGFASLASAGGGFSGIASGGS
GFSGAASSGSGFSGVASSGSGFSGGGFGGFSAIPPAGGFGGAASGTFPATGGGFGGFSNQ
GSGGGFSSFSGSGGSARPPPNLLTQMRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggtctcaatacacaaagaattagttgatgaagttgaaggcgatcaaatcggttctaaa
aactaccgattttgtctgattggcgagcctatatcaatcgtttccgatgtcgattccgat
attttcgatctcgaaaagcctccgtcgcagcctctggcgctctccgaacgcttcggactc
ctcttcgtcgctcattccaccggtttttgtgttgtgaagactaaagatgcgattgattca
tcgaagaagacggaaggcagagcctcggtgcaggagttgagtgtggtggatgtaccgatt
gggaaggtttccatactggcattatctgctgactctttgacacttgctgtttcggttgat
gctactgctgagcttcatttcttcttggttactgcgcttcttaataaggagcagaagcct
tcattctcctgctcaattgaagactctagtgtaattaaggacataagatggacaaagcat
gtggacaaagattatcttgttcttttagaaaacgggaagttatatcatgggtgtgctcaa
aatgatctgaagaacgttgcagacaatgttgatgcagttgaatggagtatgagaggtgat
tttgttgctgtggcaagaaacaaagttattagcattttatcttcaagttttgatgaaaaa
ctgagcatgtctctatcatcaaagtcaactgttggaaatcctgatgttgacagcagcata
aaagttgattccatcaggtgggttcgtccagattgcattattttagggtgctttcattta
actgatgacggtacagaggagggttaccttatccaagttatcactagccaggagggagaa
atcattaatccctcctccaatccagttgtaatacagtttaacgatgtgttcctcggtttt
atggatgatgttgtgccctctgcaagtggtccacatatgtttttgagttatctacaccaa
tgtcagcttgcaattattgccaacagaaaaaatgtcgatcagcacattgtattgtttgat
tggtcgagagatgataagaaggaagctgcgatggttgagattcttaatgatgcttggatt
ccaagaattgattgtcgaggtgatggcgaagataatatagttattggcctctcgatagac
aaaatttcccaggataaacttgctaagatcaactttggagaagaaactgaagtttcccct
tgctgtgtacttgcgtgccttacagttgatggaaagcttaccttctttcattttgcaagt
tccataggcaattcaaccgtacaagatgctaattgtataagctcagaggatgaggatgtt
cctctatcaattgctacagaagtacaaccgtttgatgttctttcgagaattgaggaacaa
aagagaggggctgaggaagccaaagaaagtgctatagtttacaagcctgtacatgcttac
attcctcaaattacatctaatgatgattatactagtggaaaagagatggtcaaacaagtt
ctagattcacagaccatcaacacacaagcacaaatgactcctgttgtaaatttgaattat
gatggaaagggccagctatcagatttacctgagaagcaaggtgaaattttaagaccatcg
gcactcatgatatctaacactgacagttctggagatgcggtcaaggatctgaaaaataat
gaacctcaaacaattgcagaagttatatctaacaatgatactccttcagaaaaacttaca
attcgtatatctgatttggctgttcacagcaatgtgtcaaaaggttttgggggtcacgga
gcattgcaagcacaaaaaggatcaactgctatacaggattcttcgctcaagtcaatttca
agtggacagttcaatatatctactcctgctgagggaagggcttcaatgttaccttctagt
aaaattcaaatgattcaatcaaataccaaaagtactacacatgttcaacacctaaataat
ttgccttctaaagatattggtggctcctttaatctcaaaccttataagaacaaacctcca
gcaatagtagggaatatggaatctttaccagaatcccgtagcccacaagttccatctaga
gaaaaaattgcgctggaaaattcttccaacttggctgataccactggacgttcccgttta
caatctttgaagggactgctgagttctggatcaaactcgtcaaaacaattcctcagtgtt
gaagagatgaccaaagaattggatctacttcttgaacatatagaaggacttggtggcttt
ggtgatgcatccatgtctcaccaaaataactcagttatagctctagaagatgggatctgg
actttgtctgaaagatgcgggaattggaagggtatcatggataagcgacttgctaagatc
caactcattcttgaaaagacagttcaagctttagcgagaaagatatacatggaaggcatt
gtcaagcaggccactgatagccgatattgggatctgtgggatcaccagaggttgagttct
gaactagagttaaagcgacggcacttgttagaactaaaccaggagttgactaatcagcta
attgatctggaaaagcatttcaactctcttgagctcaataaattttctgagtgtgctgat
tctggcatgaatcctagaactatgcaaagcaagcatgggtcatcgagatatgtaaattcc
ttgcatagtttacaaaatacaatgagcgcacaactagcagctgctgagcatctttctaaa
tgtctctcaaagcaaatggctgtcctgagcattgaatcaccttccattaaaaaaccgaac
gtgaaaagagatttatttgaaacaataggcatcccttataacgatgcctcttacaactct
cctgggagtgaaagaaaaacttcaaatacctcttcaaaacagggtcgtctgagtttgtca
aattctgttgctggtaaagaacaatcctggagaaaagactcaaccagacttaaaagttct
gaaccagaaactgcaaggagacgcagagattctttggacaggaactggtctagctttaac
cctccaaaaacaactgtaaaaagaatgcttctgcaagacaatcgccagagaccgaaaact
ggtaggtcgtcttttgggattgaccagcaactctttaatcgtgaattggagagatcagca
tatgttgctactgaacaatctaccagcagctcagctaccatttcgaattcattcaaaggc
aaagttacacaaaatgcaacgccaaggtctcctgaaattgcgacaacattgttcaaaact
gaactgcacaatgcatcacagcctaggacgaatttttccccattgctttcacagtcaact
ggaagttcagggagtggtcttaataaatttgcagttgatgatcttaggtcgacaaagcaa
tctggatttgaccttcagcaaacacctgcaagttccactaggtttcctgaaaaaatactc
ccatcctcgaagaaaatagatattgttcaaaattcaactgacaaacagattgggctatct
ggatttgctagtggaaacttaaagcatgaacctttagtcactgaaagtttgttctctggt
aaaagtagcaaaactcagtcctctgctgcgttggcctttggttcagcgcccagtctttct
taccctgggactattggaaacaatcccggtcaatttactgcagcctcattgtcatcatcg
tcatattcaagttctatatcaaactcagtgagagatttgtcgccaccacatccaaaacca
acgtccccaggcgtgtcatctactgctgtatcatcaggcagcttgacagttaattctagt
actagtgttctaaaagcacccccgcatggatcaacagtttctgctgcgatttctcagcct
tcagagaaatttgttaattcatctgctgcaatttcttcaaatttctcatacaagcctccc
agcactgatgtagtcaagccaagcattgaaccagataagaagtctgaaatgctgaattca
acttcaaactctggattacaaataggtagatctgatattaaacttgaacctcctgttaca
tcaaaggctacaagcgaagtttcaaccagttcacagtctggaagtcaattcagtttcagt
gtttcacattcagccacaaagcctgatctggaacaaccatctcctgccattctagcttca
gcttctctttcaagtcttgcaactgcgaacgatcagaggattgataattcagctgttata
tatacgcaagaggatgaaatggaagaggaagctcctgaagaaagtcgatcaactgaactt
acattaggtagtcttggtgggtttggtattggaactattcctacaccaaccactcttaaa
ccaaatccatttggtagtacttttgctagcacaactagtccagcaaaccctccattttca
atgacagttcccggtggtgagctgttcaaaccagcatcttttagcttcccatccccgcag
ccctctcaaccgtctcagccttcaacttttgcttcttttgccggtggcattagtagtggg
acttctgctcaagtacctactggaggatttggccattctgcacaaactggagctggccaa
caagctttagggtcagttcttggttcttttggacagtcaagacagctgggtgcgggacta
cctggggctggcatcacttctgtgggtggtagctttgggggtttttctggcaatcaatca
gctggtggttttgctggtaatcagcccactggtggtttttcaagtgcagtagctggaggt
ggctttgctagtctagcttctgcaggtggaggcttctctggtatagcttctggaggcagt
ggtttctcaggtgcagcttcttcaggtagtggcttctctggtgtagcttcttcaggtagt
ggcttctctggtggtggatttggtggatttagtgccattcctcctgctggtggttttgga
ggggctgcttccggtacatttcccgcaacaggtggtggatttggaggttttagcaaccaa
ggaagcggtggtggcttttcttcttttagtggtagtggaggttctgcgagacctccacct
aatcttttgacccagatgagaaagtag
DBGET
integrated database retrieval system
