Daucus carota (carrot): 108195994
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Entry
108195994 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108195994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108195994
03036 Chromosome and associated proteins [BR:
dcr03036
]
108195994
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108195994
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108195994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
108195994
NCBI-ProteinID:
XP_017218528
LinkDB
All DBs
Position
7:complement(5184512..5193191)
Genome browser
AA seq
1005 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGTQSTFGQASSGSSNPFAPNPFGSTTPFGTQTGGSLFGGSATGV
FGSNQASSPLPSTPVFGASSSPAFGSSVPAFGASSTSGFGNTSSSSFGGSSVFGQKPSFG
GFGSSTTQTSPFGSTFQQSQPAFGSNLFGSTPFGGSSQSAFSAPSTPTFGSSSTPAFGAT
NTPAFGATSSPAFGSVSTPTFGSTGNAFGVSNAPVFGSSSPAFGAASTPAFGATSAPAFG
TSSSPSFGASTTPPFGASSPSFSFGSTPAFGQSTSAFGSTQFGASPSPFGAPSSAFGAQT
SSPAFGSPGFGSSTFGGQRGGSRVAAYTPTAEADAGTGTQPAGKLESISAMPVYKDKSHE
ELRWEDYQLGDKGGPNSAAQPAGAAGFGTNTQPNPFSSSSTFGQASAPANPFSSNNATNP
FGQKSAPFSTPGFAASTSAFGSSAFGSTTNANPFGSTSSAAPSLFGSTTSTFGGTPASPF
GSAATTSAFGTSTSIFGSTSAQGTTSSPFNSGLNFGNTQQSPLFQSNTPSIGQSSSAFGQ
TPSFGQTTPGFGQTNMFNTPSTGFGANMFSTTPSLLTTSSQMGFGQTMPSQSSPFQLSQP
SQNAGAFGNFGQTQAAGLSGFGGTPGIFGQSSYGQSSATPNTAVVQQAPVLNPFGTLPAM
PLMSIGRAGTSPSIQYGISSLPVVDKPAPARISSLLTSRHLSQRRVRLPARKYHPKNNGL
KVPFFSDDEEAPTTPKADTLFIPRENPRALVIRPLEQWPGRTNGDKRSLSKEHTPVQKSD
EDIANNGPTDEQSDRVKLGQKPNGVHDEHLVQKDDAYITLTGHRAGEAAIVYEHGADIEA
LMPKLRHSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGETDVRRLDLE
SLVQFNHREVIVYMDESKKPPVGQGLNKPAVVTLLNVKCFDKKTGRHFTEGPRIDKYKEM
LRKKAEDQGAEFVSYDPIEGEWAFKVSHFSRYELRDEDLGLDDWE
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatcgactaatccttttgggcagtcatctactagcccatttggcactcaatca
acctttggccaagctagcagtggaagtagcaatccatttgcgccaaacccctttggtagc
acaacaccgtttggcacacaaacaggaggctcactttttggtggtagcgccacaggtgtg
tttggttcaaaccaagcttcatcgcctttaccttcaacaccagtgttcggtgcttcatca
tccccagcatttggaagctctgtacctgcttttggagcttcttctacatcaggatttggt
aatacttcatcttcatcatttgggggttcctctgtatttgggcaaaaaccttcttttggt
ggctttggatcctcaactacccagacaagtccatttggaagcacatttcaacagtctcaa
ccagcatttgggagcaatttatttggatctacaccttttggtggatcaagtcagtcagca
tttagtgctcctagcactcctacatttggttcatctagcacccctgcatttggtgcaaca
aacacaccagcttttggtgctacaagctccccagcctttggttccgtctcaacaccaact
tttggcagcacaggaaatgcatttggtgtttctaatgctcccgtcttcggatcaagcagt
ccagcatttggggctgcaagcactccggcttttggcgcgacaagtgctccagcatttggc
acttcaagtagcccctcatttggtgcctcaacaactcctccttttggagcctctagtcct
tctttcagctttgggtcaacaccagcatttggtcagtcaacatctgcatttggaagtact
caatttggggcttctccttcaccttttggagctccaagctccgcatttggggcccagact
tcttcaccagcatttggaagcccaggttttgggtcatcaacttttggaggtcaacgtggg
ggaagtagagtggccgcctacacaccgactgctgaagcagatgctggcactggtacacag
cctgctggaaaactagagtcgatatcagcgatgccagtttacaaagataaaagtcacgag
gagcttagatgggaggattatcagctgggagacaaaggtgggccgaattctgctgctcag
cctgctggtgcagctggctttggaaccaatactcagcctaatccttttagttcctcatct
acgtttggtcaagcatctgcccctgcaaacccattttcatccaataatgccacaaaccct
tttggtcaaaaatctgcaccatttagtactcctggttttgctgcatctacttctgctttt
ggttcttctgcctttgggagcacgaccaatgcaaatccttttgggtccacatcatcagca
gcaccttctttgtttggttccacaacatcgacatttggtggtactcctgcatctcctttt
ggttcagcagctacgacgtctgcgtttggaacttcaacatctatttttggctcaacatca
gctcagggaacaacatccagtccatttaatagtggcttgaattttggaaatacccaacaa
tctcctctctttcagtctaatacaccttcaattgggcaatcaagttcagcttttggccag
actccttcctttgggcagactacacctgggtttggtcagaccaatatgtttaatactcca
tctactggttttggcgcaaatatgttctctactactccatcactgttaacaactagcagc
caaatgggatttggtcagacaatgccctctcagtcatcaccttttcaattaagtcaacca
tctcaaaatgcgggagcttttggaaactttggtcagactcaagcagctggtttgagtgga
tttggtggtacaccaggcatttttggtcagagtagctatggacaatcgtcagctactccg
aacactgcagttgtacaacaagctccagtattaaatccctttggtacattacccgcaatg
cctttgatgtccatcgggcgtgctggaacttcgccttcaattcaatatggaatttctagt
ttgcctgtggttgacaaacctgctcctgcccgaatatcttcactgcttacttctcgacac
ctttctcagaggcgtgtaaggctgcctgccaggaaatatcatcccaagaataatggtcta
aaggttccttttttcagtgatgatgaagaagcacctaccacgccaaaggcggacactctt
ttcattccacgggagaaccctcgagctctggtaattcggcccttggaacagtggcctggt
agaacaaatggggacaaaagatctctatcaaaggagcacacccctgtacaaaagagtgat
gaagatatagcaaataatggcccaacagatgagcaaagtgatcgcgttaaattgggtcaa
aagcctaatggggtccatgatgaacatctcgtacagaaagatgatgcctacattacttta
actggtcacagggctggcgaggctgccattgtttatgaacatggagcagacattgaggca
ctgatgccaaagctccgccattctgactattacacagaacctcgaatccaagagttagca
gcaaaagaaagggctgaaccaggtttctgtcgacacgtaaaagactttgttgttgggaga
cacggttatggaagtatcaaattccttggggagacagatgtgcgtcgacttgatttggag
tcacttgtccaatttaaccacagagaagttattgtgtatatggatgagagcaagaagcct
ccagttggacaaggacttaataaacctgctgtggtaactctccttaatgtgaaatgtttt
gacaagaaaactggccgccactttacagaaggtcccaggattgataaatacaaagaaatg
ctccgaaaaaaggccgaggatcagggtgctgaatttgtgtcttatgacccgattgaagga
gagtgggcgtttaaggtcagtcatttcagcaggtacgagcttagagatgaagatttaggt
ttagatgactgggaatga
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