Daucus carota (carrot): 108197381
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Entry
108197381 CDS
T05350
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108197381
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
108197381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
108197381
NCBI-ProteinID:
XP_017220470
LinkDB
All DBs
Position
8:26475630..26484756
Genome browser
AA seq
1392 aa
AA seq
DB search
MATASHPNPPLTATEIIALAQTHPHPHPLPPFLLSQSSHQTLISLLHSLPSSSISLYTSS
LLSLIPLSPSLSPILPSLLLSYISLFLSHSLPRDRTSLSTLQLFHSHLDTVPVPELIKLS
ELIISSLSKIKESEDAQILDVLPNCLDLIYKSNERKCVDSTIDRVILSDWSKALLVKIVS
VVYEFRFLNKERCREFVDKVFDEMGNVELQDLPSLVYQLLVLASKGFCKREVIEGILVFF
GCKLEGKGSSTVRQVEGTVLLHVNFAVKQDPSLGHELIGILRCDVRVFNYFVVAVLLSVA
RIRRFNDSAMGILKATLANAYKDCKFAGVCKWLPDDLKEEYLQTALVLEKAILRAVNESN
YGREHIVPSIVRFGFVLLESLDEGSQKGLCKSHGLMGSQKLGMQMLKCLFEVHDMARNEI
IEQCKFRILSAKPEQSLAIMRLLCCLVQCSPYPMLEYVSHLKELLDYFTYMNGKVAIHLV
DALLPLTRLSRDLRDYTILVVRKAMFRREDLVLEAATSAIMKLILAEKKARKNVLNSFEE
SSSQASCSQQAEVPCGIGVGLFQEFNGLLQRCLYRQAKVKEIMYDGFVELILVDPSFSGS
VFDFLLPHFLQFYKEDAEIQLKINQCLKLENGKICIHEPLDCLLSCISWILLMQPLGKSD
ASDARHSFGFSLTQENEAGKNFFGESFSRALSKTRNFLRTANFEDLLGETQDAHSAQVKE
EKKKYSAWILSGILEVVVNIITTEFEKATEVKKLDLEKELLKYVDVYASLEKYFSSGTGK
RGIVRSTATQISSKPETGRTTLFKERTLLASTSIGQLFQIALGLYERGSNSTATSQNHSQ
SSMRESSIQCFKLLLFALNASLRLIKSFSAAGKDDKLKSLVYGELKLLSSPMLKLIRFLK
LSPNTMADHKKNETKGKKDAEDRQELFHLALVCLKELIATALQCPEQEGIMKELVSEAIF
ENGPKDVPHVDSVDECEVENRTDDQTEISVYKFIQLIIKPIFSELLAASSFQEMEVLCDI
TMSIGTKLSGERRRSLGDWALHICKSCDVKNSKIAKSVFNFVYSLSPSPNDLAVAEDVAK
ELLKVMGSDTGSPLTKSEIYPLLQVSTENIVASSVLHLIEPIVVDMDWFTTKLKSYLAAN
QKSIMLDENDRQAPVLALEQIFYTTAEAVVKVLSPFLSMNLKDPQAEHLLRVATRFYKNL
ARISKLQIAPKGCKPVLPSHSYLKLVEITCKDLTAPLYRFVDVMQQNQQESARKGILNKI
KRENRCIPELIFQIEDYEKYLILLSKAIKINLLRHAKRSTSRDFRIRESDDSNGQEGTEN
HQANENNDDSAAEEAEDDDATEEPGDNGHDLEEPGSPVADDSVSDDENGLNFPSAKRTKT
TNKVVQDSDDES
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgagccaccccaacccgccactcaccgccaccgaaattatcgccctagcc
caaactcacccccacccccaccctctcccccccttcctcctctctcaatcctcccaccaa
accctaatctctctcctccactctctcccctcctcttcaatctctctttacacttcctct
ctcctctctctcatccctctctccccttctctctcccctatactcccctctctccttctc
tcctacatctccctctttctctcccactctctcccccgcgatcgcacctctctatcaacc
ctccagctcttccactctcatctcgacaccgtccctgtccccgaactaatcaaattatcg
gaactaattatatcgagtctatcgaaaataaaagaatccgaagatgctcaaattctcgat
gttttgcctaattgtttggatttaatttacaaatcgaatgagaggaaatgtgttgattcg
acgattgatagggtaattttgagtgattggagtaaggctttgttggtgaagattgtttct
gttgtttacgagttcaggtttttgaataaggagaggtgtagggagtttgtagataaggtg
tttgatgaaatggggaatgtcgagttgcaggatttgccttcgttggtttaccagttgttg
gtgttggcgtcaaaggggttttgtaagcgggaggtgattgaggggattttggtgtttttc
gggtgtaaattagagggaaaagggagttcgacagttaggcaagtggaagggactgtgttg
ttacatgtgaattttgcggtgaaacaggatccttcgcttggacatgagttgattgggatt
ttgaggtgtgatgttcgggtgtttaattattttgtggtggctgttttgttgtctgtggct
aggattcggaggtttaatgactctgcaatggggatactgaaagcgacgttggcaaatgct
tacaaggattgcaagtttgcaggggtttgtaaatggcttccggatgatttgaaagaagaa
tatctacagacagctctggttttagagaaggcgattttgcgagctgtcaatgaaagcaat
tatggaagagagcatattgttcccagcatcgtaaggtttgggtttgtattgcttgaatca
ttggatgagggaagccagaaagggctctgcaagtcccatggtctgatgggttctcagaaa
ctaggcatgcagatgctgaaatgtttatttgaagttcatgatatggcgaggaatgagatc
attgaacaatgcaaattccgcattctttcggcaaagccagagcagagtttggccattatg
agattattatgctgtctggtccagtgcagtccatatccaatgttagaatatgtttcacat
ctaaaggaattgctggattactttacctacatgaatggaaaggttgcgatccatcttgtt
gatgctctactccccctcaccagattaagtcgtgatcttcgggattacaccatattagtt
gtgcgcaaggctatgtttagacgtgaagacttggttctcgaagctgcaaccagtgccatt
atgaaactgatattagcagaaaagaaagctcgaaaaaatgtgttaaattcttttgaagaa
tcatcaagccaagccagttgcagccagcaagctgaggtaccatgtggcatcggtgttggt
cttttccaagaatttaatggtctgctgcaaagatgcctttatcggcaggcaaaagttaaa
gagattatgtatgatggctttgtggagctcattttggtggacccatcattttcggggtct
gtttttgatttcttgctcccccattttttacagttctacaaagaggatgcagaaattcaa
cttaaaattaaccagtgtcttaaattggagaatggaaaaatttgcatacacgagcctctt
gattgccttttgtcttgcatttcctggattcttttaatgcaaccacttggtaaatctgat
gcttcagatgcacggcactcttttggtttctctcttactcaagagaatgaggcaggaaag
aacttttttggcgagtcattttcaagggctttatcaaagacaaggaactttcttagaact
gcaaattttgaagacttgcttggagagacccaggatgcgcactctgcacaagtaaaagaa
gaaaagaagaaatacagtgcttggattctatctggaattctcgaggtggtggtaaatatc
attactactgaatttgagaaagcaactgaagtcaagaaattagatttagaaaaagagctt
cttaagtatgttgatgtttatgcatctttagaaaaatatttttctagtggaactggtaag
agagggattgttagatctactgctactcaaatatctagtaagcctgaaacaggtagaaca
actttatttaaagaaagaactctgctggcaagtacaagtattggccagctttttcaaata
gctctggggttgtacgaaagaggctctaatagcactgcaacttcccagaatcatagccag
tcatccatgagggaatcatcaatccaatgcttcaaattgttattgtttgccttgaatgct
tctcttagactgataaagtctttctcagcagctggcaaagatgataagctgaaaagttta
gtctatggggaactgaagttgcttagttcaccaatgttgaaactgattcggtttctcaag
ttgagtccaaataccatggcagatcataagaaaaacgaaaccaagggtaaaaaagacgct
gaagacagacaggaacttttccatttggcgctagtttgtttgaaggaattaatagcaaca
gctctgcagtgccctgagcaggaaggcatcatgaaggaattagtgtcagaagctatattt
gagaatggacctaaagacgttccacatgttgattcagttgatgaatgtgaagtagagaat
cgaactgatgatcaaactgaaataagtgtatacaagttcatccagttgatcattaagcct
atattctctgagcttcttgctgcttcatcttttcaagaaatggaggtcctctgtgatata
acaatgagcattgggacaaagttgtctggggaaaggaggaggtctcttggagactgggcg
ctacatatctgcaaaagctgtgatgtgaagaattctaagattgccaaaagtgtttttaat
tttgtctattcattaagtccatctccaaatgatttagctgttgctgaagatgtggccaaa
gagttgttaaaagtaatgggatcagacactggcagcccactaacaaaatcggaaatatac
cctcttctacaagtttctacagaaaatatagtagcttcttctgtgctacatttgatagaa
ccaattgttgttgacatggactggttcaccactaaattgaaatcttacttggcagctaac
caaaagagtatcatgcttgacgagaatgatagacaggcacctgtgctggcattggaacaa
atcttttacacgactgctgaagccgtagtgaaagttttatctccttttctctcgatgaac
ctcaaggatcctcaagcggagcatttgttgagagtggctacaaggttttacaagaattta
gcccgaatttcaaagcttcaaattgcaccaaagggttgtaagccagtgttacccagccat
agttatctgaagcttgtggaaataacttgcaaggacttaactgcccccctgtatagattt
gttgatgtgatgcaacagaatcagcaagagagtgcgaggaaaggaattctgaacaagatc
aaaagggaaaacagatgcatcccggaactgatattccagatcgaggactatgagaagtat
ctcattcttctcagcaaggcaatcaaaatcaatttgttaaggcatgcaaaacgtagcact
tcgagagatttccgaataagagaatcagatgattctaacggtcaagaaggcactgaaaac
caccaagccaatgaaaacaatgacgattctgcagcagaagaagctgaagatgatgatgca
accgaggaacctggagacaatggacatgatttagaagagcccgggtcgcctgttgcagac
gattctgtctctgatgatgaaaatgggcttaactttccaagtgcaaagagaacaaagacc
actaacaaagttgttcaagattcagatgatgaatcatag
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