Daucus carota (carrot): 108199813
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Entry
108199813 CDS
T05350
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108199813
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108199813
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PAN2_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
108199813
NCBI-ProteinID:
XP_017223289
UniProt:
A0A175YQ22
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Position
8:complement(29500262..29511347)
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AA seq
804 aa
AA seq
DB search
MSTAKRAYKLQEFVAHSSSVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSTEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
EFKSHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRSMTFNPDG
RTLLCGLHESLKVFSWEPIRSHDSVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDIS
RVEPYAIVTPRSNSIQGTKANVSGSISVLTENTAKTGTARLSVSQNSDSVMKETKAFARL
SVSQNSEPVQKESKSFTSTGTTPSTPQRVIPNAGPKPSTVGSMGIPAATAPNVGSKTSSV
SSLSIPAVTAPRKNLPKIHATPNTSFFNKSDGVSVVVPRNSARLDQAAELRREGISGKPS
LTMQSRPSAFRKYATTKDDPERASVSGQSETEMFTTNGFSGHDKSTYPSVQTSSMGTSAS
TLKDNRSSIHSKFQMNPVTEPPSSYPHESYETRTHRIDRDASSMENQRGVRTRSLVANWE
KKDKAPGPESNPSGAVSSVNTLPINVEMEPGNEEDTISALMEPHNKFVGSLQSRLAKLEM
VHKYWERNDIKGAIGMTQKMSDNAVLADVVSILTEKPDIVTLDICTCVLPLLASLLESEM
DWHQGVSLELLIKLVRVFGSVIYSSLSASSSVGVDIEAEQRLERCNLCYVELERVKHCLP
VLTRKGGTIAKSAHELSLALQEVS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgctaaacgtgcttacaagctgcaggaatttgtagctcactcttcgagcgta
aattgtctcaagattgggaggaagacatcgagggttttagtaacaggaggagaggatcac
aaggttaatctttgggcgattggcaaaccaaatgccattttgagcttgtcaggtcattct
agcggtattgattctgttagttttgattctactgaagtgttggtagctgccggggcagcg
agtggtacaattaagctatgggatcttgaagaggcaaaaattgttcgcacccttactggt
catcgatcgaactgtatatccttggacttccacccatttggtgaattttttgcttccgga
tcactggacactaatctaaagatatgggatattaggcggaaggggtgtattcacacctac
aagggccacacaagaggggtaaatgcaatcagatttaccccagatggtcgttgggtcgta
tctggtggagaggacaatacagtgaagctctgggacctaactgccggaaagctcttacat
gaattcaagagtcatgaaggccagattcaatgcatagattttcatcctcatgagttctta
cttgcgacaggttcagctgacagaactgttaaattttgggaccttgaaacctttgagcta
ataggatcagctggtccggagacctctggagtacgctctatgactttcaatcctgatgga
agaacccttctttgcggtttgcatgaaagtttgaaggttttttcatgggaaccaattaga
agtcatgatagtgtggatgttggatggtccagattatctgatctgaatattcacgagggg
aagctacttggttgttcttacaatcaaagttgtgttggagtatgggttgtggacatatcg
cgcgttgaaccatatgcaattgttactcctcgatcaaacagtatccaagggacaaaagct
aatgttagtgggagcatatcagttctgacagagaatactgcaaagactggcactgcgagg
ctgtctgtttcacaaaactctgattctgtaatgaaggaaacaaaagcttttgctaggctt
tcagtgtcacagaactccgagcccgtccaaaaggagtcgaaatcttttacatccacggga
actacacccagtacacctcaacgagtgattccaaatgctggaccaaagccaagtacagtt
ggttcgatgggcattcctgccgcaacagcaccaaatgttgggtcaaaaacatcttcagtt
agttcattgagcattcctgctgtaacagctccaaggaaaaatttgccaaagatccatgca
acacccaacacttcattttttaacaagtcggatggcgtatcggtagtagttcctagaaac
agtgcaagattggaccaggcagctgaattaaggcgcgaaggaatttctggaaaaccgtcc
cttaccatgcagtcaagaccatcagcttttcggaaatatgcaactactaaagatgatcca
gaaagggccagtgtttcaggacagtctgaaactgaaatgttcacaaccaatgggtttagt
gggcatgataaaagtacttatccttctgttcagacatcatcaatgggaacttctgcaagt
actttaaaagataatagatcttctatacattctaaatttcagatgaatccggtgacagag
ccacctagcagctatccgcatgaaagctatgagactcgaacgcatagaatagatcgagat
gcttcttctatggaaaatcaacgaggagtacggacacgttctcttgttgcaaactgggag
aagaaagataaagctcccggtcctgagagcaatccatctggtgccgtttcttctgttaac
acactcccaattaatgtggaaatggagcctggcaacgaggaagatactatttcagctttg
atggaaccacataataaatttgttggctcattgcagtctcgtctagcaaaattggagatg
gtccacaaatactgggaaagaaatgatattaaaggggccattggaatgacgcagaagatg
tctgataatgctgtccttgctgatgttgttagtatattgacggaaaaacctgacattgtt
acactggacatatgcacctgtgttttgccactccttgcaagccttcttgaaagtgaaatg
gattggcatcaaggagtttcactggaattgctgataaagcttgtcagggtctttggttca
gtgatctattcttctttatctgcatcatcatccgttggtgttgatattgaggcagaacaa
aggcttgaacgttgcaatttatgctatgtcgagcttgaaagggtcaagcactgtctacct
gtcctaaccagaaaagggggaaccatagccaaatctgcccatgaattgagtcttgcactt
caagaagtctcataa
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