Daucus carota (carrot): 108201050
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Entry
108201050 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108201050
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH_2
RVT_1
Integrase_H2C2
Retrotrans_gag
RT_RNaseH
RVP_2
Ty3_capsid
zf-CCHC
rve
zf-CCHC_2
Chromo
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
108201050
NCBI-ProteinID:
XP_017224825
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Position
9:complement(3055781..3065390)
Genome browser
AA seq
1393 aa
AA seq
DB search
MDPGRAERELRQEIVTVREIARAKLSAAAEDQGTYGDLVEWAIWMMKEAMPPRRQNRANN
RDDNNDNNNPEPTMAQILQILAQQTANLTQQQERQANPQVTFKNFQSVNPPEFKGSADPI
EARIWLKEIEKAFMLVKVRDEQKTEFASYYLKEEATYWWESVRAMEGTEDVTWDRFKELF
LEKYFPQFLQDRMELQFLELKQGDMSVAEYEKKFAELARFVPTYVDTDRKRAKRFQQGLK
AWIRGKLAILELDTYAAVVQKAMIAETESEMSQKEKEGKKRKPEHHEGQFQQGRECQNPP
ARTPMIRDQPARNQPNRTPAAGITCFRCGKPGHMVKDCKVPAPGNPTLRIMGSTPVVPEV
PKARTYNMTMRDAVQDADVVAGTLTYRNCEVEILGNKFCADLIPFKLGEFDVILGMDWLS
KHNAQIDCRSKKVMLKTPNEKTIVFRGQKQVKKFLTMIQTKRLLRQGCEAYIAYVTDQSR
ELVKLEDIPVVNEFPDVFPDELPGLPPDREIEFAIDLLTIKNRYPLPRIDDLFDQLKGAR
CFSKIDLRSGYHQLKIKQEDIPKTAFRTRYGHYEFLVMAFGLTNAPAAFMDLMNRVFKPY
LDKFVIVFIDDILIYSRIAVPMTRLTRKEEKFVWTEKCEESFQELKKRLVSAPVLSLPDE
QGNFVIYSDASHKGLGCVLMQHDKVIAYASRQLKPHEQKYPTHDLELAAISLKYIFTQKE
LNMRQRRWLELIKDYDCTINYHPGKANVVADALSDVNNLVGEELCTQKDDQGILRFSSRI
WIPPVQELKDEVLNEAHSSAYSIHPGSTKMYRDLKENYWWPDMKREIAEWVSKCYTCQRV
KAEHQRPSGLLQPLEIPEWKWEHIAMDFIVGLPRTRANHDAIWVIVDRLTKSAHFLPINE
RFSLDKLVHMYLKEIVVRHGVPVSIVSDRDPRFNSRFWKSFQECLGTRLNMSTAYHPQTD
GQSERTIQTIEDMLRVCAIDFKGNWDEHLPLVEFSYNNSYHASIGMPPYEALYGRKCRSP
VCWDEVGERKLLGSELVQQTKEVIETIQKRLIAAQNRQKKYADQARKDMEFEEGEPVLLK
ISPWKGLSRFGKKGKLSPRYVGPFEILRRVGKVAYELALPPHMEHIHNVFHVSMLKKYHP
DSRHVIEYEPVELQADLSYVESPIEILDRKEKVLRNKVVKIVRVLWRNPKVEESTWELES
DMCEKYPHLFENTSVFTMSDPIIPPYPQHSDTTVSGPPPPQIPEPRPPVPPTLEEVLAAA
AVVPPRDIASTSRARPFIPGPPPSTPSSTRGSSVHTSFRTAQHPVPYHEYEAMVMERQYL
LGQIRELERVIQMMDPGRAERELRQEIVTVREIARAKLSVAAEDQGTYGDLVTWAIWMMQ
ELDKLGGPTFPWN
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggaccctggtagagctgagcgagagctgaggcaggagattgtgaccgtcagggagatc
gcaagggcaaagcttagtgccgcagctgaagatcagggtacctacggtgatctagtggag
tgggccatatggatgatgaaggaagctatgcctcccagaagacaaaaccgtgcaaacaac
cgtgatgataacaatgataataacaatccagaacctacaatggcccagattcttcagatc
ttggcccaacagactgccaacctgactcagcagcaggaaaggcaggctaatccccaggtt
actttcaaaaactttcagtctgttaatcccccagagtttaagggttcagcggaccctatt
gaggctaggatatggttgaaggaaattgaaaaggcatttatgttggttaaagtgagagat
gagcagaagactgagtttgctagttattatttgaaggaggaggccacctattggtgggag
tctgtgagagcaatggaagggacagaggatgttacttgggataggtttaaggagttgttt
ttggagaaatactttcctcaatttctccaggatcgaatggagttacagtttttagaattg
aagcaaggggatatgtcagtggctgagtatgagaaaaagtttgctgagttggctaggttt
gttccaacctatgtagataccgacaggaaaagagctaagagattccaacaggggttaaaa
gcatggatcaggggaaaactagccatattggaattagatacttatgcagctgtagttcag
aaggcaatgatagcggaaacggaaagcgaaatgtctcagaaagagaaagagggaaagaag
cgtaagccagagcatcacgagggacagtttcagcagggaagggaatgtcagaacccacca
gcacggaccccaatgattcgagatcaaccagcaaggaaccaacccaataggactccagca
gctgggataacatgttttaggtgtggaaaaccaggacacatggtgaaggattgcaaggta
ccagctccaggtaaccctacacttagaattatgggatccactccagtagtcccagaagtt
cccaaagccagaacctacaacatgactatgagggatgcagttcaggatgccgatgtggtg
gcaggtacgcttacttataggaattgtgaagttgagatcttaggaaataagttttgtgcc
gacttgatacctttcaagttgggagagtttgatgttattttagggatggattggttatcg
aagcataatgctcagatagattgtcgtagtaaaaaggtgatgttaaaaacaccgaatgag
aagacgatagtatttcgagggcagaaacaggtaaagaagtttttgactatgattcaaacg
aagagattgttgcgtcaaggttgtgaagcttatatagcatatgtaactgatcagagtcga
gaacttgtgaagcttgaagatattcctgtagtaaacgagttcccagatgtatttccagat
gagttacccggattacctccagatagagaaattgaatttgcaatagatttattaaccatt
aagaatagatatccattaccccgtatagatgatttgtttgatcaattgaagggagcgaga
tgtttttcgaagattgatttaagatcgggataccatcagttaaaaattaaacaagaagat
atacctaaaacagcttttagaacccgatatggccactatgagtttttagtgatggccttt
ggattaaccaatgcccctgcagcttttatggacttaatgaacagagtctttaaaccatat
ttggataaatttgtgattgtattcatagatgatattttgatttactcaaggattgctgta
ccaatgacgaggcttacccggaaagaagaaaagttcgtgtggactgaaaagtgtgaagaa
agcttccaagaattaaagaaaaggttagtatcagccccagtgttatcacttccagatgag
caagggaattttgtaatttatagtgatgcttctcataagggattgggttgtgtgttgatg
caacatgacaaagtcattgcttatgcatccagacaactcaaaccccatgagcagaagtat
cctacacatgatttagaactagcagccataagtctgaagtatatctttacacagaaggag
cttaatatgaggcagagaaggtggttagaattgataaaggattatgattgcaccatcaat
tatcaccctggaaaggcaaatgtagtggcagatgctttgagcgatgttaataatttagtt
ggggaagaactttgtacccaaaaagatgatcagggaattctaagattttcttctaggata
tggattccaccagtacaggagctgaaagatgaagttttaaatgaagcacatagttccgct
tattcaatccaccccgggagcactaagatgtatagggatttaaaagagaattattggtgg
ccagatatgaagagagagattgcagaatgggtaagtaaatgttatacgtgtcaaagagtg
aaggcagaacaccagcgaccgagtggattgttacaacccctagagattccagaatggaaa
tgggagcatattgcgatggattttatagttggattacctagaacgagggcaaatcacgat
gccatatgggttattgtagatagactaactaagtcagctcatttccttcccattaacgaa
agattctcattagacaagttagtccatatgtatttgaaagagatcgtcgttcgtcacgga
gttccagtctccattgtatctgatcgagatccacgattcaattcgagattctggaagagc
tttcaggaatgcttgggcaccagattgaatatgagcactgcttatcatccacaaactgat
ggtcagagcgaaagaactattcaaacgatcgaggatatgttacgtgtttgtgccatcgat
tttaaaggcaattgggacgaacatctaccgttagtggaattctcatacaacaacagttat
catgcaagtattggaatgcctccttatgaagctctttatggacgtaaatgtcgctcaccc
gtatgctgggatgaagtaggagaacgcaaactacttgggtcagaactagttcagcagacg
aaggaagttattgaaaccattcaaaagagactgattgcagcacagaatcgtcagaaaaag
tacgcggatcaagccaggaaggatatggaatttgaagaaggagaaccagtattactgaag
atttcgccatggaaaggactatcccgatttggcaagaaaggaaagctaagtcccagatat
gttggaccattcgagatcttaaggcgcgttggtaaagtggcttatgagttagcattaccc
ccgcatatggagcatattcataacgtctttcatgtgtcaatgcttaagaagtatcatcca
gattctaggcatgtgatagagtacgagccagtagagcttcaggcagatttgtcttatgtt
gagagtccaatagagattctagatagaaaagagaaagtattgagaaacaaagtggtgaaa
atagtgagagtattgtggagaaacccaaaagtggaagagtcaacttgggagttagaaagt
gatatgtgtgagaaatatcctcacttatttgaaaatacatctgtattcacgatgtcagat
cctatcattcccccatatccccagcattcagacaccactgttagtggacccccaccccct
cagataccagagcctcgccctcctgttccacccactttggaggaggtgttggctgcagca
gcagtagttcctcccagagacatagcctcgacctctcgtgctaggcctttcatacctgga
cccccacccagtactcccagttccacccgaggttcttctgttcatacctcctttcgtacc
gcacagcaccctgttccttaccatgagtatgaggcgatggtgatggagcgccagtatctt
cttgggcagattagggagttagagcgtgttatccagatgatggatcctggtagagctgag
cgagagctgagacaggagattgtgaccgtcagggagatcgcaagggcaaagcttagtgtc
gcagctgaagatcagggtacctacggtgatctagtaacgtgggctatatggatgatgcag
gagctggacaagcttggaggtcctacttttccttggaattag
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