Daucus carota (carrot): 108204392
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Entry
108204392 CDS
T05350
Name
(RefSeq) disease resistance protein RPV1 isoform X1
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_4
NACHT
ATPase_2
LRR_8
AAA_16
AAA
AAA_24
AAA_17
LRR_3
AAA_14
AAA_18
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108204392
NCBI-ProteinID:
XP_017229284
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All DBs
Position
1:25388457..25395530
Genome browser
AA seq
1225 aa
AA seq
DB search
MASTSSQTPASWDVFLSFRGIDTRLGFTSHLYSALDHNGIWTFMDDPELRCGEVISAALL
KAIQESKIYIVVLSVNYASSSWCLDELVEILKCNKTMERAVIPVFFNIDPSVVRYQNGRF
GEHFKRHEIRYADEMERVENWRLALCQLAQYSGIHVDGKKSEADIVNDIVEESLLLLHTE
PTALDVAKYPVGLESRVNDITAALLSSGTKGVIKIGIYGMGGVGKTTLAKALFNKLLLGS
FEGSCFLENVRENSGNIKGLASLQQQLISDVLKISKDEVKVSSVDQGTKLIERRICSRKI
LVVIDDLEDNKKFESLVRPFAPGSVVIITTRDEEILDVIEVETQYRYKVNEMGDAEANTL
FFRHAFRDTEPNDTLRILSKDILHLAGRLPLALEVFGSYLYKKPEVKWKSYIERLQRDPD
SSIQQRLIISLDAYGSDDPLLKKMFLDIACLFIGRNKENLVEILNTYYPYADDKINILQK
RSLLTFNDKNEVRMHDLLQDTGKKIARNNSPDEPGKHSRLWVRKEICDLLEKDKGTEAIE
GILLNHFEPELPKPKLEDLLELLESEDDLLRYFGPELSKPKLEESFSTKSLRRMTRLRFF
FLDGINLTGKFKLPLEDLRWFCWNHCPLKCLPSDFCPEKLVILELPNSKLTTMWKEKMVS
QKLFFTPDSRGLPRLINLKTLNMSFSEDLTTTPDFRRLPHLESLNLEGCKSLKEVHKSIG
SLVWLVSLNLKDCVNVRSLPDTICDLGALEVLCIEKCTGLKALPRELGKINSLKELNASR
TSFPKLPDSIGDLSKLVKLELWRNFNEKKLESLPNTICNLRALEVLKVTVKALPVELGNI
ESLRELITSGIAISKLPDSIGNLRSLEILDIFFSRTLERLPDQLWKLTRLSELRAYATIC
LEKLPDIESGQTSLPLTKLSLYHSNITALPSGISQLSNLEDLDLGSCGHLLSIAELPPNL
TYMSVDDCTSLKRLNLSSLKLLRKLHLQNCSALTKILGLEELTSLVWLICRGSPLTHTLT
KPLFQMYSGFEEKIDIWLEAEDFPDWIIQSSVEWSADDDISDGDASSSVNLQPNLSHNYL
GMILCFDLQDKDAYYSVTTSANNIFESRIYSSSIVIVPRSILTVTDSDHKIQFASRVRRH
WIHLLYKNEDNCITVNVADERNTPSANDTVDMSNDDHSASELEDDEDEDEDKEDGRMLEL
QREGDDGNETEYESFSSDEDSEGDR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacaagttctcaaactcccgctagctgggacgttttcttgagcttccgtggc
atagacactcgacttggtttcaccagtcatttatactctgccctggatcacaatggtatt
tggacttttatggatgatcctgagctacgctgtggagaagttatctcagctgcattgctc
aaagctattcaggaatctaaaatttacattgttgtcctctctgtaaattatgcttcttcg
agttggtgccttgacgagctggtagagatccttaaatgtaacaaaacaatggaaagagcg
gttattcctgtgtttttcaacattgatccatcagtagtgcgataccaaaatgggagattt
ggagaacattttaaaaggcatgaaattagatatgcggatgaaatggaaagagtggagaat
tggcgccttgcactatgtcaacttgctcaatattcaggaatacatgtagacggtaaaaag
tctgaagctgatattgtcaatgatatagttgaggagagtctactacttttacacacagaa
cccactgctttagatgttgccaaatatccagttgggttggaatcccgcgttaacgacata
acagcagcattgttgagcagcggcacaaaaggtgtcattaagatcgggatatatggtatg
ggtggcgtaggcaaaacaactcttgccaaggcactttttaataaactcttgctaggaagc
tttgaaggaagctgcttcctcgaaaatgtgagggaaaattcggggaatataaaaggccta
gcgtctttacaacaacaactcattagcgatgttcttaaaattagtaaggacgaagttaaa
gttagcagtgttgaccagggaactaagctgatagaacgaagaatctgttcaagaaaaatt
ttggttgttattgatgacttagaggacaataagaaatttgagtcacttgtgagaccattt
gctcctgggagtgtagttataataactacaagggatgaagagatacttgatgtaattgaa
gtggaaactcaatatcgatacaaggttaatgagatgggtgacgctgaggcaaatacacta
ttttttagacatgcatttcgagatactgaaccaaatgatactttaaggatattgtctaaa
gacattctacatcttgctggaagactccccttggctctagaggttttcggctcgtacttg
tataagaaacccgaggttaaatggaaatcttacattgagagactgcagcgagatcccgac
agcagtatccagcaaagacttataattagcttggatgcctatggatcagatgatcccctg
ctaaagaagatgttccttgacattgcttgtctattcattggaaggaataaagaaaatttg
gttgaaatattgaatacttactatccctacgcggatgataaaattaatattcttcagaaa
agaagtctattaacgttcaatgacaaaaacgaagtgcgaatgcatgatctgcttcaggat
acgggaaagaaaatcgcgcgtaacaactctcctgatgagcctggaaagcatagtagatta
tgggtacgaaaagagatatgcgatctgttggagaaagacaagggaacagaagcgattgaa
ggtatcttgctcaaccattttgaacccgagcttcctaaacccaagctggaagatttgctc
gaattattggaatccgaggatgatttgctccgctattttggacccgagctttctaaaccc
aagctggaagaatcgttttctacgaaaagtttaagaagaatgactagattaagatttttt
ttcttggacggcattaatcttactggcaagtttaaactgccactagaagatttgaggtgg
ttttgttggaatcattgtcctttaaagtgtttaccttctgatttttgccccgaaaaactt
gttattctggagttgccgaatagcaaattgacaacaatgtggaaagaaaagatggtttcg
caaaaattgtttttcaccccagattctagaggactaccgcgtctcataaatttaaaaact
ctaaacatgtcattttctgaagatttaactaccaccccggacttcagaagactaccgcat
cttgaaagtttgaatcttgagggttgtaaaagtttgaaggaggtccataaatcaattgga
agtttggtgtggcttgtttccttaaatttgaaggattgtgtaaacgtaagaagtcttcca
gataccatctgcgacttgggagctttggaagttctatgtattgaaaaatgtacagggcta
aaagcactgccaagagaattagggaaaatcaattccctaaaagagctcaatgcttccaga
acaagttttccgaaattaccagattcgatcggagatcttagtaagcttgttaagctggaa
ttatggcgaaatttcaacgaaaagaaacttgaatctcttccaaacaccatttgcaactta
agagcactggaagttttgaaggttactgtgaaagcattgcctgttgaactggggaatatt
gaatctctaagagagctcattacatcgggaatagccatttcaaaattgccagacagcatt
ggcaacctgagatcattggaaattcttgatatatttttttctcgtactctagagaggtta
cctgatcaactgtggaagcttacaaggttatcggagctaagggcatatgcaactatttgt
ttagagaaacttcctgacatagaatcaggccagacttcattaccattgacaaagttgtct
ttatatcatagtaatatcactgccctgccatcaggtattagtcagctctcaaacctagaa
gatcttgatctcggcagttgtggtcatctgttgtccatagcagaacttcctcctaatctg
acgtacatgtctgtcgatgactgtacatctctgaaaagattaaatctatccagtttgaaa
ctgttgcggaagttgcaccttcaaaattgcagtgctttgacaaagattttagggctggag
gaactcacttctttagtttggctaatttgccgcggctctccactgacacatactttaaca
aagccattgttccagatgtactctggttttgaggaaaaaattgatatttggctcgaggca
gaagattttccagattggattattcaatcaagtgtagaatggtcagctgacgatgacatt
tcagatggagacgcgtcatcttctgtgaatttgcaaccaaacttgtcacacaattacttg
gggatgattctctgcttcgacctgcaggataaagatgcctattattctgttacgacttct
gcaaataatatattcgagagccgtatatattcatcaagtatagtgatagttccaagatca
atattaacagtcacagatagcgatcataaaatccaatttgcatcaagagtacgcagacat
tggattcatctcctgtacaaaaatgaagacaattgcatcactgtcaatgttgcagatgaa
agaaacaccccctcggccaatgatacggttgatatgagtaacgatgatcatagtgcaagt
gagcttgaggatgatgaagacgaagacgaagataaagaggacggcagaatgctggagctt
caaagagagggcgatgatggaaatgaaacagaatatgaatcatttagcagtgacgaagac
tcagagggtgatcgatag
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integrated database retrieval system
