Daucus carota (carrot): 108205355
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Entry
108205355 CDS
T05350
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00740
Riboflavin metabolism
dcr00790
Folate biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01240
Biosynthesis of cofactors
Module
dcr_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
108205355
00790 Folate biosynthesis
108205355
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
108205355
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
108205355
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Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
108205355
NCBI-ProteinID:
XP_017230779
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Position
1:complement(26449082..26456434)
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AA seq
553 aa
AA seq
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MASLNMSCPSPSLPRLQTVNGLSLSNGVQLVNLFNSNGFTSESSCRMGGRLGFSMKADGK
VKSTLLPVNGSLFLVKKSRKNALHSSSSSGIKVQSDAVSLGTLSAETTPSGTNFPTDSDE
YDLDHPTAGFSSIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAASKVTPEAMAFIVKHGT
GIVCVSMKEQDLERLQLPQMVTHKDNEEKLTTAFTVSVDAKRGTTTGVSARDRATTILTL
ASKDSKPQDFNRPGHIFPLRYREGGVLKRAGHTEASVDLTMLAGLEPVSVLCEIVDEDGS
MARLPKLREFAKAENLKIVSIADLIRYRRKRDHLVERSSAARIPTMWGPFTAYCYRSIID
GIEHIAMVKGEVGEGLDILVRVHSECLTGDIFGSARCDCGNQLGLAMKQIEAAGKGVLVY
LRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKL
MTNNPSKYVGLKGYGLAVSGRVPLVTLITKENKRYLETKRAKMGHVYGQGYNSNASNIIP
ENGKPSTEETSES
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctcaacatgtcctgcccatcaccatctttgcccagattacagacagtaaat
ggcctgtctttgtccaatggtgttcagttagtgaatctgtttaattcaaatggatttaca
tcagaatcttcttgtcggatgggtggtagattgggctttagtatgaaagctgatggcaaa
gtcaaatcaacattactgcctgtaaatggaagcttatttcttgtgaagaaaagcaggaaa
aatgctctccatagttcatcctcatctggtattaaggtacagtctgatgcagtatctcta
ggaacactctcagcagaaactactccgtctggcaccaatttccctactgatagtgatgag
tatgacttggatcatcccacagcggggttctcgtccattccagaggccattgaagacata
cgtcaaggaaagatggtggtggtcgtagatgatgaagaccgagaaaatgaaggggatcta
attatggcggcatcaaaggttacgcccgaggctatggctttcattgtgaagcacggaact
ggaattgtttgtgtgagcatgaaagagcaagacttggagagattgcagcttcctcagatg
gttactcataaagataacgaggagaaacttactactgcatttacagtgtccgttgatgca
aaaaggggtacaactacaggggtgtcagctcgtgatagggcaacaacaatactaactctt
gcatccaaagattcaaaaccacaggattttaatcgcccaggacatatatttccattgaga
tacagagagggaggtgttttgaaacgagcaggtcacacagaagcatcagttgatctcact
atgctggctggacttgagccggtttctgttttatgtgagattgtggatgaagatggatca
atggctcgattaccaaagcttcgggaatttgcaaaagcggagaacttaaaaattgtttcc
atcgctgatcttatcagatatagaaggaagagggatcacctagtggaacgttcttcagct
gcaagaatacctaccatgtggggaccctttacagcctactgttatcggtcaatcatcgat
gggattgaacatatcgcaatggtcaagggtgaagtaggggaggggttagatattcttgtc
agggtacactcagaatgcctcacaggagatatatttggttcggcaagatgcgattgcgga
aatcagctcgggctggcaatgaaacagattgaagcggcaggaaagggtgtacttgtatac
ctccgtggtcatgaaggaagaggaattggtttgggacacaagcttcgtgcttataacctg
caagatgatggacgtgacactgtggaggccaacgaagaattgggtttgcctgttgattca
agagagtatggtattggtgctcagatactaagagatcttggggtccgaacgatgaaactg
atgacaaacaacccttcaaaatatgtgggactcaagggttatggtttagcagtgtcagga
agagttcctctggtaacccttattacaaaggaaaacaagagatatttagaaacaaaacgg
gcaaaaatgggtcatgtttatggccaagggtataatagcaatgccagcaatatcatccct
gaaaatggtaaaccaagtacagaagagacatcagagtcatag
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