Daucus carota (carrot): 108213111
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Entry
108213111 CDS
T05350
Name
(RefSeq) disease resistance protein RPV1-like
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
LRR_4
C-JID
LRR_8
AAA_22
nSTAND3
AAA_16
TOBE
LRR_5
AAA
Motif
Other DBs
NCBI-GeneID:
108213111
NCBI-ProteinID:
XP_017240342
LinkDB
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Position
3:complement(601855..607348)
Genome browser
AA seq
1255 aa
AA seq
DB search
MEHYNHLLVVLIWVLPLLVILPMITIIMRSISTALTAPSSSSPSPPGSRDVETLTAPSSS
SAFPRSSWDVFLCFHGKDTRGNFTAHLYKALHDAGFKTFMDEPQLRKGEEISVGLLNAIR
GSKMCVVVISKNFAYSKWCLSELLEIVSCERTEGLVVVPVFYYVNPSDVRHRRKEFMEGL
RSQRNTHSVEMIKKWECALAAVGKLKGYHLKKDAGENEADIVQDIVKNAERLHASVKVHN
EEHLFGVDSVVEDIYQKLQMESNDVRALGICGMGGIGKTTIARAFYNSYHDKFPVSCFIE
NVKENLQGGKNLLWLLQQLLVKLLRNNDCRVTDVESGIRQLKQILCLNKALIVLDDLDQS
IPSELQIKLCSLSSPGSRIIFTTRDANLLNQLKVDIPEVDIYTVKRLGQNDSLELFSYHA
FRKSMPPEMFRELSAEFVTYAGGLPLALKVLGSSLRGRNHVSFWEAKLIKVQKIPMDQVQ
EILQLSYDELDDETERAIFLDIVFFFVGKDKDDAVYTFKSCDFYPDHGIPILEDRCLITV
DECNRLQMHNLIQDMGRKVAREEFKQGNGRYLRLYQENACERLQNLEGADHIELLLLDLT
RSTARQLTTKIFRKLCKLRLLEIIDPHNIISGDFKNSCPELRCMRWSHSPWTSVNAKFCS
PELVCLDMSYNQLDSSWKPPGSLKSLNVSHSKLKSIRNLSDLKVLERLLLYGCQNLSKVH
PTIGQLSNLGHLDMGRCRLLKELPESIGQLTLLRHFNLSHCVNLNQLPGTITQLTRLNHL
KLESCHNLKRLPERMGNMQGLKTFVASWSGIEQLPDSFGELIKLVHLNLFWCKNLTALPD
SICKLMLLKALDLGGCHELKRLPEELGKMQSLERLHADCEQINELPDSIGQLSSLQVLNL
SACRNLRYLPSSIWNLTSLSTLQFPSSYREIINLPERVKSTRLERLDLCCNIRLWLPKIQ
SVSSLKELSITDESQSFSTETLSLLKLSNLHSLILRNHSGCGPSFYELPLNLQQLWVYDN
ATLEQLPDLSRLKCLRGLVIRRCISLRSLPPLPPHFQSLKVDGCTKLQDVPDLSMLKDIE
ELSFVRCSNLKSISLKESSLQARLLFSFRAHLPNKMIPEWFNYTSKECKLSFQISPALGE
NLLGIALWVVYKCKETQSPSKFTAVITNKTKATREDVDIDVAVRNGVELRSTVQCKRAQD
MSVKSGDQITVSIKRKLYCYISNEDDFGGKWVPSGEVEVETWGAHILQKTDFTGL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggagcactacaatcatctgctggtagttttaatttgggttctgccacttctcgttata
ctccccatgatcactatcatcatgcgttcaatttcaactgctttaactgccccttcttcc
tcttctccatctccgcctggcagccgggatgtggaaacattaactgcgccttcttcctct
tctgcattcccacgtagcagctgggacgtcttcctatgttttcatggtaaagacactcgc
ggaaacttcactgcgcatctctacaaagctttgcatgatgcaggatttaaaaccttcatg
gatgaacctcaactccgaaagggcgaagaaatttcagtgggactactgaacgcaatccgt
ggttcaaagatgtgcgttgttgttatttcgaagaactttgcatattctaaatggtgcctt
agtgagctgttggagatcgttagttgcgaaagaacagaaggcctggtggtggttcctgtt
ttttactatgttaatccatcagatgtacggcaccggagaaaggaatttatggaaggtctt
cgcagtcaaaggaacactcactctgttgaaatgataaagaagtgggaatgtgctcttgct
gcagttgggaagctaaaaggataccatctcaaaaaagatgcaggagaaaatgaagcagac
attgttcaagatattgtgaaaaatgcggaacgactacatgcatctgtgaaagtacacaat
gaggaacatctgttcggggtagattctgtcgttgaagatatttatcaaaaactacaaatg
gaatcaaatgatgtccgtgcccttggaatatgtggtatgggaggtattggaaaaactaca
attgccagagctttttacaatagttatcatgacaagttcccagttagttgctttattgaa
aatgttaaagaaaatttacaagggggtaagaatctactttggttacttcaacaactcttg
gttaagcttctcagaaacaatgattgtagggtcactgatgtggaaagtggaataagacag
ttgaaacaaattctttgtttaaataaagctctcattgttctggatgatttggaccagtca
atcccttcagaattgcagataaagctctgcagcctgtcttctccaggaagtaggattatt
tttacgacaagagatgcaaatttgctaaatcaactgaaggtagatattccagaagtagat
atatacacggtgaaaagattgggacaaaatgattcattagagctgtttagctatcacgcc
tttaggaaatcgatgccacctgagatgtttagagagctctcagcagagtttgtaacttat
gcaggaggtcttccattggctctaaaggtgttaggctcatctttgcgtggtagaaatcat
gtgtcattttgggaagctaagcttatcaaggttcagaaaattccaatggaccaggtacaa
gaaatccttcaactaagctatgatgaattggatgatgagacagagagagcaattttccta
gatattgtcttcttctttgttggaaaggacaaagacgatgctgtttatacatttaaatct
tgtgatttttatcctgaccatggaataccaattctagaagacagatgtttaataacagtt
gatgagtgtaacagattacagatgcataatcttatccaagacatggggaggaaagttgct
cgcgaagaatttaagcaagggaacggcagatacttgcgcttgtatcaagaaaatgcatgc
gagcggttgcaaaatctagagggagcagatcatatcgaacttttgttactcgacttaacc
agatccacagcaagacaattgactaccaaaatatttagaaagctgtgcaagttgagatta
cttgaaataattgatccacataacattatctcgggagattttaaaaattcatgtccggag
ttgaggtgcatgcgatggtcccattccccgtggacaagtgttaatgctaaattttgttca
ccagaacttgtctgtcttgacatgtcatacaatcagcttgattcatcgtggaagccacct
gggagcttgaagagtctaaatgtgagtcactctaagctaaaaagcatccgtaacttgagt
gatttgaaagtgcttgagaggttattactgtatggttgtcaaaatttatctaaagtacac
ccaactattggccagttgagtaatttgggtcatttagatatgggtcgctgccgcctgttg
aaagaattgccggagtcaattgggcagttgactctgttgagacattttaatttaagtcat
tgtgtcaatctgaatcagttgcccgggactatcacgcagttgactcgtttgaaccatttg
aaactggagtcttgccacaatctgaaacggttgccagagcgaatgggtaatatgcaaggc
ttaaaaacgtttgttgcaagttggagtggaattgaacaattgccagattcgtttggagag
cttattaaattagtccatttgaatttgttttggtgcaaaaacctaactgctcttccagat
agcatatgtaagctgatgttgctcaaagcacttgatctaggaggctgtcatgagctgaag
cgattgcctgaggaattggggaagatgcaatccttagaacgtcttcatgccgactgtgaa
caaattaacgaattaccagattctattggtcaactgagtagcctacaagtgttgaacttg
agtgcctgtcgtaatcttagatatcttcccagtagcatctggaatcttacatcactttct
acattacaatttccctcatcgtacagagaaataattaatttgcctgagagggtgaagagt
acgagattggaaagactagacctatgttgtaatataaggttatggctacctaagattcaa
agtgtctcttctttgaaggagctaagcatcactgatgagagccagagtttttcaacggag
actttgagtcttcttaagctgtctaacctacatagtcttattttgcgtaaccattcaggg
tgtgggccctcattttatgaacttcctctgaatctgcaacagttgtgggtatatgacaat
gcgacattggaacagctacccgatttatccagattaaaatgcttgaggggactggttata
aggagatgcatcagccttcgatctctccctccacttcctcctcattttcaatcactcaag
gtagatggatgcacaaagctgcaggatgtaccagacctttcaatgttgaaggatatagaa
gagctaagttttgttaggtgcagcaatctaaaatcaatcagtttaaaagagagttccctt
caggcaagactattgttttcatttagagctcatctaccaaacaagatgattccagaatgg
ttcaattatacaagcaaagagtgcaaactctctttccaaatttcaccagccctgggagag
aacttgttaggtattgcactctgggttgtctataaatgcaaagagactcagagtccatct
aaatttacagctgttattaccaataagacaaaggctactagagaggacgtcgacatcgat
gtagcagtgagaaatggagtcgaactacggtcgacggtgcaatgcaaaagggcacaggac
atgtcagtaaaaagtggtgatcaaattacggtttcaattaaaagaaaactatattgttat
attagcaatgaagatgattttggaggaaaatgggttccctccggagaagtggaggtggag
acctggggggcccatatactacaaaaaacggatttcactggattgtga
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