Daucus carota (carrot): 108214389
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Entry
108214389 CDS
T05350
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
dcr03013
Nucleocytoplasmic transport
dcr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108214389
03008 Ribosome biogenesis in eukaryotes
108214389
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108214389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108214389
03009 Ribosome biogenesis [BR:
dcr03009
]
108214389
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108214389
03036 Chromosome and associated proteins [BR:
dcr03036
]
108214389
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108214389
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108214389
Pre-60S particles
108214389
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108214389
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108214389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Adaptin_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
108214389
NCBI-ProteinID:
XP_017241858
LinkDB
All DBs
Position
3:25129830..25141930
Genome browser
AA seq
1077 aa
AA seq
DB search
MAAEKLRDLSQPIDVPLLDATVSAFYGTGSKDERNAADLILRDLQSNPDTWLQVVHILSS
TQNLNTKFFALQVLEGVIKYRWNALPVDQRDGMKNYISDVIVKLSSDENSFRRERLYVNK
LNIILVQILKHEWPSRWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQL
KIKELKQSLNSEFQLIHELCLYVLSASQRTELVRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPLPSYRNLTLQCLTEVAALNFGDFYNLQYVKMYSIFILQLKGILPISANIPEAYA
QGSSEEQAFIQNLALFFTSFYKFHIRILETAPENITALLVGLEYLIDISYVDDTEVFKVC
LDYWNSLVLELFEAHHNLDNPAATVNMMGLQQMPLLHGLADGHGSQLMQRRQLYANPMSR
LRLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQ
MLKKLSKQLNGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEVTKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
RRKFVILQVGESEPFVSELLTSLPTTIVDLEPHQIHTFYESVGTMIQAESDPQKRDEYLQ
RLMELPNQKWAEIIGQARQSVDFLKDPEVVRVVLNILQTNTSAAASLGTYFLSQISLIFL
DMLSVYRMYSELISASIAEGIPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQ
FVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYRGAMIEDIPRIFEAAFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFQALILLSSEQLKLVMDSIIWAFRHTERNIAETGLN
LLLEMLKNFQASEFCNQFYRSYFLTIEQEIFAVLTDTFHKPGFKLHVSVLQHLFCLVESG
SLTEPLWDSSTVAYPYPNNAMFIREYTIKLLGSSFPNMTATEVANFVNGLYESRADLSTF
KNHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagaagctgagggatttgtcacagcctattgatgtgcccttgctcgacgcc
accgtctccgctttttacggcaccggatctaaggatgagaggaatgctgctgatctaatt
ttgcgcgatttgcaaagcaatcctgatacctggcttcaggttgtgcacattctttctagc
acacagaatctcaataccaagttctttgcactccaggttttggaaggtgtgattaagtat
agatggaatgccttgccggttgatcagcgagatggaatgaagaactatatctcggatgtt
attgttaagctttccagtgatgagaattcttttcgacgagaaaggctatatgtgaacaaa
ctaaatattatactggttcagatactaaagcacgagtggccatcaaggtggcgaagcttt
attcctgatctagtcgcagcagcaaaaactagtgagaccatttgtgaaaattgcatggct
atattgaaacttttaagtgaagaagtttttgatttctcaagaggtgaaatgactcaactt
aaaattaaagagctgaaacagtcactaaacagcgagtttcagctcattcatgagttatgc
ctatatgttctatcagcatctcaaagaacagagcttgtacgggcgacgctggccacgttg
catgccttcctttcatggatccctctgggttatatctttgaatccccactgcttgaaact
cttcttaagttctttcctttaccatcataccggaacctaacactccaatgcttgacagag
gttgctgcccttaactttggagatttttataacttgcaatatgtcaagatgtacagcata
ttcatcttacagttgaagggtatccttccaatcagtgcaaacatacctgaagcctatgca
caaggctctagcgaggaacaggcatttattcagaatttggctttgtttttcacatccttt
tacaagtttcatattcgaattttggaaacggcaccagaaaatataactgctttgcttgtg
ggcctcgaatatcttattgacatttcatatgtggatgatactgaagttttcaaggtttgc
ttagattattggaactccttagttttggagcttttcgaggctcaccataatcttgataat
cctgcagcaactgtcaacatgatgggactacagcagatgcccttgcttcatggtttggct
gatggccatggttcacaacttatgcaacgacgccaactttatgcgaatccaatgtcaagg
ttgagattacttatgatctgtcgcatggctaagccagaggaggtgctgattgttgaagat
gaaaatgggaatattgtgcgtgaaaccatgaaggacaatgatgttctcgttcaatataag
atcatgagggaaacacttatttatctgtcacatcttgaccatgaggatactgaaaagcag
atgctgaagaaattaagcaaacaattaaatggagaggattggacctggaacaacttgaac
acactatgctgggcgattggttccatatccgggtcaatgatggaagaacaggaaaacaga
tttcttgtgatggtgattcgtgatttgctaaatctttgtgaagtaactaagggaaaagac
aacaaagcagttattgcaagtaacattatgtatgttgttggccagtacccgaggtttctg
cgtgctcattggaagttcttgaaaacggttgtaaataagttgttcgaatttatgcacgag
actcatcctggagttcaggacatggcttgtgatacctttttgaaaattgttcaaaagtgt
aggcgcaaatttgttatacttcaggttggagaaagtgaaccatttgtttctgagctcttg
accagtcttcctacaactattgttgatcttgagcctcatcagatccatacgttttatgaa
tctgttggtactatgattcaagcagaatctgacccgcagaagagagatgagtatctgcag
agactaatggagcttccaaatcagaaatgggctgagatcattggtcaagcacgccagagt
gttgatttcctaaaggacccagaagtcgtgagggtggtgctcaatatattgcagacaaat
acgagtgctgctgcttcacttggaacatatttcttgtcacaaatttctttgatctttttg
gacatgctaagtgtttatagaatgtatagtgagcttatatcagcaagcattgctgaaggc
atcccctatgcttcaaggacatcttttgtaaagcttttgcgatcagtgaaaagggaaact
cttaagcttatcgagacatttctagataaagccgaagatcaaccacaaataggaaaacaa
tttgtgcctccaatgatggacccagttctaggtgattatgcccgcaatctgcctgatgcc
agagaatcagaagtcttgtctctttttgcaacaataataaataagtataggggtgccatg
atagaggatatccctcgcatatttgaagctgcatttcagtgtaccctggagatgattaca
aagaatttcgaagattatcccgagcatcgtctcaaatttttttccttacttcgcgccatt
gcgacacattgttttcaggcattgattctgctgtcaagcgagcaacttaaacttgttatg
gattctataatatgggcgttcagacatactgaaagaaatattgctgaaacgggactgaac
ctgttactggagatgttgaagaactttcaggcgtccgagttctgtaatcaattttaccgt
agttacttcttaactatcgagcaagagatatttgcggtgttgacagatacatttcacaaa
cccggtttcaagttgcatgtctcagtacttcaacatctattctgcctggtggagtctggc
tcattgactgaacctttgtgggattcgtcaacagttgcctatccgtaccccaacaatgct
atgtttatccgtgagtatacgataaagctgttgggttcatcgttcccaaacatgactgca
actgaggtggccaactttgtgaatgggctgtatgagtcgagagcagatctttccacattc
aagaatcacattcgagactttctcgtgcaatcaaaagagttctcagctcaggacaacaaa
gatctgtatgcagaggaagctgccgctcaaagagaaagggagcgacaacgaatgcttagc
attccagggcttattgctcccaatgagatacaagatgaaatggtggattcgtag
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