Daucus carota (carrot): 108215245
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Entry
108215245 CDS
T05350
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108215245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108215245
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
SR proteins
108215245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_5
zf-CCHC_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108215245
NCBI-ProteinID:
XP_017243144
UniProt:
A0A162AGB3
LinkDB
All DBs
Position
3:5949147..5954437
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AA seq
317 aa
AA seq
DB search
MPRYDDRYGATRLYVGRLSSRTRSRDLEHIFSKYGRVRDVDMKHDYAFVDFSDSRDADDA
RYSLNGREVDGSRLIVEFAKGVPRGPGGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAG
DWKNKCYRCGERGHIERSCHNSPKKLSRGERSYSRSPVRSHSRRRDRSWSRSYSRSRSYS
RSRSPRRERGGERERRRQRSPSYSRSPEPKGSPPLSKARKNSPTPVDESPIENVSPSPER
AKRATEQDGYEYTESLRGRSRSPLSPGRYTPISPGNGSPLEANGIANGAGRSPDAKDESP
HEDDYSNRFSPRGSESP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgatatgatgatcggtatggagccactcgtttgtatgttggtcgattgtcatcc
aggacaaggtcaagagacctggagcacatctttagcaaatatgggagagtgcgagatgtg
gacatgaagcacgactacgctttcgttgattttagcgactctcgggatgctgatgatgca
aggtacagcttaaatggccgggaagttgatggcagccgtttgattgtggaatttgccaag
ggggttccacgtggtccaggtggttctcgagaatatctgggcagagggccccctcctggg
tctggacgttgcttcaattgtggccttgatgggcactgggcccgagattgcaaggcaggg
gactggaagaacaaatgttatcgatgtggagagagaggtcatattgagaggagctgtcat
aacagccctaagaagctgagccggggtgagaggagttattccaggtcaccagtgagatct
cactcacgtcgccgtgacagaagctggagtcggagctatagccgcagccgcagctacagt
cgatcaaggtctccaagaagagaacgaggtggtgaacgtgagcggaggcgtcagagaagt
cctagctacagcagaagcccggagccaaagggttccccacctctctccaaggcgaggaag
aacagcccaacacctgtagatgaaagccccattgagaatgttagcccttctccggagaga
gccaaaagggctactgaacaagatgggtatgaatacactgagagccttcgaggtaggagc
agaagtcctttaagccctggaaggtatactcctatctctccagggaatggcagccctttg
gaagctaatggcatagctaatggagcaggtcgtagcccagatgcaaaagatgagagtcct
catgaggatgactacagtaatcgtttctccccaaggggcagcgagtcaccttag
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