Daucus carota (carrot): 108217555
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Entry
108217555 CDS
T05350
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
Motif
Other DBs
NCBI-GeneID:
108217555
NCBI-ProteinID:
XP_017245872
LinkDB
All DBs
Position
4:16293577..16300067
Genome browser
AA seq
1463 aa
AA seq
DB search
MWERNSQKLTLDLDILNEQFHSQSKKQTNLEMELLTSHKVQDGMKKEIDQLKLLLEEVVL
KKTTSKRATSDLEDVIQGRKELEKELKYQKEENTHLAVQLDMSQESNIELLSVLQELEEI
IEKQKVEIEHLSKQQLRFTELEGSIEGHLEENRIFSLQLQQLQESEKRLLVNVQSLEQDL
EAKNSELENERRSYEQSLLDIEQEYRQKLSVAEEDVVKLSANLTESLAVIEKEKLECSSG
SSMDLINEIKELKEMMQELEINCSELTSENLSLLCKQKELEKVSEEAQLDNSITSTELLK
QIDLTFYNIKRSWYTIPFEVNDECESHYSDLVNRNHPVASKGWVESLCSFFVEVNKVLEA
KISKCEEVLKSSALEMNTKEKTIAEAKHQMVLLSLKNQELGNSNIVLQAKLTELQVELAK
QSSEVQLLESDILSKEEQINLLEQGQIELNNQVSGMKKERDLLQENMDIVVSESNMNSKC
LDDLQTDLIALRSSVASHVTANRNLQREISEHEAGKEELQLHLLKVEEENVKLTECISGL
EAQLKIVKDTNKSSQLELENSKSVATALQDDIRRLRFDIEKDKSIQQAELKNIETRLSEA
QEECEYRKIAYQKSQASGQSLAETCSTLQKMNEELRKQNLEFYENSKSVTISHQNEIRTL
TEKMEGQKTFLKENSQDLENQLRKAQEEYEFQKIVYQKSQTSVESLTKNCSTLQKLNEDL
RKQNLELHENSKFVVMKLQDEVIRLTLEMDTENNILQEKLQDMQKRQSEFQEECEYLKIA
YQKSQASGENLSQRCSTLHKLNDELRNQNMDLHENSKSFTISIQDEIRRTTVEMETLNNA
LQKKLQDMENRLSEAEQECGYQKMSNRKLQASTLNLSESCSTLQKINEDLKKQISDLNEN
SKSVAIGLQDEIRRLTVEMEAEKMVQQEKLQDMENKLSEAQEESEYQKMTNQKSQKSAMD
LSKKCNKLQEINEESRKKIKDLHERCTFLETSLRESQEHLSNSSQKTESLEAELSSILEE
FAVKEKSLTSELDVLLQENGEQKKKLIMGETLLNQMYMEKTAEVGNLQSEVENLINQISA
TNDERDKIASEAVNEVTKLQSDKEKLNCVLQEVISRAKVTEDELDRIQTEYEARVQDLIS
ELARSKQSHADYEIVLKRLTSYRSSQEKLKTSVNSLELKLTVSEYERQQLINEIAGLKGQ
IRNLAHCQDNSISLEKELDEYKCEKEKLEALLHSLSIDNENLKAEINSLQEKDSTFQKVM
SEFEDCKHKRTTLEEKLLHMEHDLIAKEASKAEDEELRNELGRMKRVNKQYKRTILQIEV
EKEELLKRVQMCNEQVKLMEAEQQDRSSTGKNNTASEDFMAKVKLLEDELAEALEANNRY
KLQLQSIFSDGLHSHSGGPRKSVSGTEVAANERYERTKSSLEIEIVDLRDRYFQMSLQYA
EVEAQREDLVMKLKASTNGKRSS
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaagaaactcccaaaagctaacacttgatctggatatattaaatgagcaattt
cattctcagtccaaaaaacaaaccaatttggagatggagcttttgacatcgcacaaagtt
caagatggaatgaagaaagaaatagatcagttaaagttattgctggaggaagtagttctg
aaaaaaacaacctccaagcgcgcaacaagtgacttggaagatgttattcaaggacgaaag
gaactggaaaaagagttgaagtaccagaaagaagagaatactcatttggctgtgcaatta
gatatgagtcaagagtcaaatattgaattgctttctgttcttcaagagttggaagagatc
atagagaaacagaaagttgaaattgagcatctgtccaagcaacagctgagattcactgaa
ttagaaggttcaattgaaggacatttagaagaaaacaggatcttctcacttcaattgcag
cagttgcaggaatcggagaaaaggctacttgttaacgttcaatcgcttgaacaagacctg
gaagccaaaaatagtgaattggaaaatgagcgaagatcatatgagcagtccctattggat
attgagcaagaatatagacaaaaactatctgttgctgaagaagatgtggtcaaattaagt
gcaaacctgacagagtctcttgcagtgatagaaaaagagaaattggagtgcagtagcgga
agcagcatggacttgatcaatgaaatcaaagagttaaaagagatgatgcaggagctagaa
attaactgtagtgagctaaccagtgaaaatttatccctcctgtgcaagcaaaaggaactg
gagaaagtgagcgaagaagctcaactggacaattctataacgtctactgaacttctaaag
cagattgacttgaccttttacaacataaagaggtcatggtataccattccttttgaggta
aatgacgagtgtgaatctcattatagtgatttggtaaacagaaaccaccctgtagcttcg
aaaggttgggttgaatctctttgcagcttctttgtagaggtaaacaaagtactagaagct
aaaatcagtaagtgcgaagaagttctaaagagtagtgcccttgagatgaacacgaaagag
aaaactattgcagaagctaaacatcagatggtgctcctcagtctaaagaatcaagaactt
gggaattcaaacattgtgctacaggctaaactcacggagctacaagtggaattggctaaa
cagtcatctgaggtacagctactggaatctgatattctgtcaaaggaagagcagataaat
ctgttagaacaaggtcagatagaactaaacaatcaggtttcgggtatgaagaaggaaagg
gacctattgcaagagaacatggacattgtagtaagtgaaagtaacatgaattcgaaatgc
ttggatgatctacaaactgatcttattgcacttagaagcagtgtagcttcacatgttact
gctaacaggaatcttcaaagagaaatatcagaacatgaggctggaaaagaagaactgcaa
ctccatctactcaaagtagaggaagaaaatgtgaaattgacagaatgcatatctggtttg
gaagcacaactgaagattgtcaaggatacaaataaatctagtcaactggagctagagaat
tctaaatcggttgcaaccgctctccaagatgatatcagaagattgagatttgacattgag
aaggataaatctattcagcaagcagaactaaagaatattgaaactagattatcagaagct
caagaggagtgtgaataccgaaaaatagcttatcagaagtcacaagcatcagggcaaagt
ttagctgagacctgcagtactcttcagaaaatgaatgaagaactgaggaagcaaaatcta
gagttttatgagaattccaaatctgtgacaatcagccatcaaaatgagatcagaactttg
acagaaaagatggagggacaaaagacttttctgaaagagaattcacaggatttggaaaat
caactgcgaaaagctcaagaggagtatgaatttcagaaaatagtttatcagaagtcacaa
acatctgttgagagtttgacgaagaattgcagtacgcttcagaaactaaatgaagacttg
aggaagcaaaatttggagttgcacgagaattccaaatttgttgtgatgaaacttcaagat
gaggtcataagattgacattggaaatggatacagaaaacaacattctgcaagagaagtta
caagatatgcaaaagcgacaatctgaatttcaagaagagtgtgagtacctgaaaatagct
tatcagaagtcacaagcatctggtgagaatttatcgcagaggtgcagtacacttcacaaa
ttgaatgatgaattacgaaaccaaaacatggacttgcatgagaattccaaatctttcaca
attagcattcaagatgaaatcagaagaacgacagtagagatggagacactaaacaatgct
ctgcaaaagaaattgcaggatatggagaatcgactgtctgaagctgaacaggagtgtgga
tatcagaaaatgtctaatcgaaagctacaagcatctactctaaatctctctgagagctgc
agcactcttcagaaaataaatgaagatctgaagaagcaaatatcggacttgaatgagaat
tccaagtctgttgcaataggtctgcaagatgagatcagaagattgacagtggagatggag
gcagaaaagatggttcaacaagagaaattacaggacatggaaaacaagctatcagaagcc
caagaagaaagtgagtaccagaaaatgactaatcagaagtcacagaaatctgccatggat
ctctctaagaaatgcaataagcttcaggaaataaatgaagaatcgaggaagaaaatcaag
gacttgcacgagcgatgtactttcctggaaaccagtttgagggaatcacaggaacatttg
tccaactcctcccaaaagactgaaagtctagaagcagaactttcttctatcctagaagaa
tttgcagtaaaggagaaaagcctgacctctgaactagatgtacttcttcaagaaaacggg
gaacaaaagaagaaacttatcatgggagaaaccttgctaaatcagatgtacatggaaaag
acagctgaagttgggaacctccaaagcgaggtggaaaaccttattaaccaaatttctgct
accaatgatgaaagagataaaatagcttctgaagctgtaaatgaagttaccaagttacaa
tctgacaaagaaaagttgaattgcgttcttcaagaagtgatttccagagccaaagtgaca
gaagacgagcttgatagaatccaaacagaatatgaagccagggttcaagatctgatttct
gagcttgcacgttccaaacagagccatgccgactatgaaatagtcttaaagagactaaca
agttacaggtctagtcaagaaaaactcaagacatcagtaaatagtcttgagctgaaactg
acagtatctgaatatgaacggcaacaactaataaacgaaattgctggtctgaagggtcag
atacggaatctagcacactgtcaggacaattcaatttctttagagaaggaacttgacgaa
tataagtgtgagaaggaaaagctggaagctttactgcattcattatctatagataacgaa
aacctaaaagctgaaattaactcccttcaagaaaaagattctaccttccagaaagtaatg
tccgagtttgaggactgcaaacacaaaagaactacgttggaagaaaagcttctgcatatg
gagcatgatctaatagcaaaggaagcatcaaaagcagaggatgaagagctgagaaatgaa
ctcgggagaatgaagagagtaaacaagcaatataagaggacaatactacagattgaggtt
gaaaaggaagaattgttgaagagagttcaaatgtgtaatgaacaagtgaagctgatggag
gcagaacaacaggatcgaagtagcacaggcaagaacaatactgctagtgaggattttatg
gcaaaggtaaaattacttgaggatgagcttgctgaggctctcgaggcaaataacagatat
aagcttcagcttcagagtattttctctgatgggctgcacagtcattcaggtggacctagg
aagtccgtatctggtactgaggtggctgcaaatgaaagatacgagaggacaaagtcatct
ttagagattgagatagtagaccttcgtgatcgttactttcagatgagtctgcaatatgct
gaagtggaggctcagcgcgaggatcttgtgatgaagctcaaagcatccactaatggaaag
aggtcgagctga
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