Daucus carota (carrot): 108219485
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Entry
108219485 CDS
T05350
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00450
Selenocompound metabolism
dcr00970
Aminoacyl-tRNA biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108219485
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108219485
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108219485
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108219485
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
108219485
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108219485
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108219485
Prokaryotic type
Other AARSs
108219485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
ATG2-VPS13_C
Toprim
Motif
Other DBs
NCBI-GeneID:
108219485
NCBI-ProteinID:
XP_017248448
UniProt:
A0A165WJW7
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Position
4:complement(14772243..14784685)
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AA seq
613 aa
AA seq
DB search
MAGRAHFSIQRNGTLLLSSSSFFHNSINFGLTHLKNPNFFRPKGLSYSSRGALYCSCSAS
NGLEKQLSSDPFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVIFITGTDEHG
EKIATAAAASGSSPSEHCDVVSQAYKELWKDLDIAYDKFIRTTESKHEAIVKEFYAKVLA
SGDIYRADYEGLYCVNCEEYKDEKELLDNNCCPMHLKPCVSRKEDNYFFALSKYQKRLED
TLQQNPGFVQPSYRLHEVQGWIKGGLRDFSISRAAVDWGITVPNDTDQTIYVWFDALLGY
ISALSEDKEHSDLQSAISSGWPASLHLIGKDILRFHAVYWPAMLMSAGLDLPKMVFGHGF
LTKDGMKMGKSLGNTIDPKSLVDRFDSDAVRYFFLREVELGNDGDYSEERFINIVNANLA
NTIGNLLNRTLGLLKKNCNSTLPVDSAVAAEGNTFKDSAEDLVAKARTEYENLAISSACE
AVLEIGNAGNLYINERAPWSLLKQGGDAFEAATKDLVIVLEAMRIIAVALSPITPSLCLR
VYEQLGYTEEQFNAATWNETKWGGLKSGHVMAQPRPVFARIEVQKEEEDVAQVVKKVSKK
KAKIPQVQTVAEA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctgggagagcccatttctccatccaaagaaatggaacattgttgttgtcttcatct
tcttttttccacaactccatcaattttggactgacccacttgaaaaatcccaactttttt
cgtccaaagggcttgtcatattcatccagaggggctttgtattgcagttgcagtgctagt
aatgggcttgagaagcagttgagctctgacccttttgttttgacgactcctttgtattat
gttaatgctcctcctcatatgggcagtgcttatactactattgctgctgatgccattgct
cgttttcagaggcttttagggaaaaaagttatatttatcactggcacagatgagcatggg
gaaaagattgctactgctgctgctgccagtggttccagtccaagtgaacactgtgacgtc
gtttcccaagcttacaaggagctatggaaagatttagatatagcttatgataagtttatt
cgaacaaccgagtcgaagcatgaagctatagtcaaagaattttatgccaaggttcttgcg
agtggtgacatataccgggctgattatgaaggcctctattgtgtcaactgtgaggagtac
aaggacgaaaaagagttgctggataacaactgttgccctatgcaccttaagccatgtgtt
agcaggaaggaagacaactacttttttgctttgtcaaagtatcaaaagcgattagaagat
acacttcagcagaatccaggttttgtgcaaccatcttatcggctgcatgaggtgcaaggt
tggattaaaggtggcttgagagatttctctatttcccgtgcagcagtagattggggtatt
actgttcccaatgacactgatcaaactatttatgtctggtttgatgccttacttggttat
atttctgcattatcagaggacaaggaacattctgatttacagtctgcaatttcttctggc
tggcctgcgtcattgcacttgattggcaaggatatattacggtttcatgctgtttattgg
ccagcaatgctaatgtctgctggactagaccttccaaagatggtgtttggccatggtttt
ttgacaaaggatggcatgaagatggggaagtctttaggcaatacaattgatccaaaaagt
ctagtggatagatttgactctgatgcagtcaggtactttttcctaagggaggttgagctg
gggaatgacggagactattcagaagaaagatttatcaatattgttaatgcaaatcttgct
aatacaattggaaaccttctcaaccgtacacttggacttctaaagaagaattgtaattca
actttaccagtcgattcagctgttgcagctgaaggaaatacattcaaggactctgcggag
gatctggtggcaaaggcacgaacggagtatgaaaacctggcaatatcatcagcatgtgag
gcagtactagagataggtaatgctggcaatttgtatatcaatgaacgggcaccatggtct
cttcttaaacaaggaggtgatgcttttgaagctgctacaaaggaccttgtcatagtactg
gaagcaatgaggattatagcagttgctttgtctccaatcacaccaagcttatgtctgcga
gtatatgaacagctcggctacacagaagaacagtttaatgctgccacctggaatgaaacc
aagtggggagggctgaagagtggtcatgtcatggctcaaccacggcccgtatttgctaga
atagaagtgcagaaggaagaggaagatgtagctcaagtggtgaagaaagtaagcaagaag
aaagcaaagatacctcaagtccagacagttgcagaggcatag
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