Daucus carota (carrot): 108220462
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Entry
108220462 CDS
T05350
Name
(RefSeq) polygalacturonase inhibitor
Organism
dcr
Daucus carota (carrot)
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GFIT
Motif
Pfam:
LRR_1
LRR_4
LRR_8
LRRNT_2
LRR_6
RII_binding_1
Motif
Other DBs
NCBI-GeneID:
108220462
NCBI-ProteinID:
XP_017249729
UniProt:
A0A164XZT6
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Position
5:complement(10581819..10583080)
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AA seq
332 aa
AA seq
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MNIESSFCPILCICMIFLCLPNLSASQRCNNNDKQALLQIKTALKNPTITDSWVSDDDCC
GWDLVECDETSNRIISLIIQDDEALTGQIPPQVGDLPYLQALWFRKLPNLFGKIPEEISA
LKDLKSLRLSSTSLSGPVPLFFPQLTKLTCLDLSFNKLLGVIPPQLSTLPNLKALHLERN
ELTGEIPDIFGNFAGSPDIYLSHNQLTGFVPKTFARADPIRLDFSGNRLEGDISFLFGPK
KRLEMLDFSGNVLSFNFSRVQEFPPSLTYLDLNHNQISGSLSSELAKLDLQTFNVSDNNL
CGKIPTGGNLQRFDRTAYLHNSCLCGAPLPEC
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgaatcatctttctgccctattttgtgcatatgcatgattttcctctgcctt
ccaaacctctctgcatcacaaagatgcaacaacaacgacaagcaagctttactccaaatc
aaaacagccttgaaaaaccccaccattacagactcatgggtgtcagacgacgattgttgt
ggttgggacctagtcgaatgtgacgaaaccagcaaccgcataatttccctcataattcaa
gacgacgaagctctcaccggccaaatcccacctcaggtgggagacctaccatacctccaa
gccttatggttccgtaaactccccaatcttttcggaaaaatcccagaagaaatttctgca
ctcaaagacctaaaatccctcagactcagctcgaccagtctcagtggccctgtcccttta
ttcttccctcagcttacgaaactaacttgtttagacttatcgtttaacaaacttttgggt
gtaatccctcctcagctttccactcttccgaaccttaaagccctgcacttagaacgtaac
gaactcaccggtgaaatccccgatatctttgggaattttgctggatccccggacatatat
ctttcgcataaccagctcaccgggtttgttcccaaaacttttgctagagcagatccaatt
aggctcgacttctcagggaacagactagaaggtgatatttcattcttgtttgggcctaaa
aaacgcttggaaatgctagatttttcaggaaacgtgcttagtttcaatttctccagggtg
caggagtttccaccctctttgacatacttagacttgaaccataaccagatcagcggaagt
ctgtcgagtgaattggctaaattggacctgcagacatttaacgtcagtgataataatctc
tgcggcaagattccaacagggggaaacctccagagattcgaccgtacggcctatctccac
aacagttgcttgtgtggtgctccattgccagaatgctag
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