Daucus carota (carrot): 108222861
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Entry
108222861 CDS
T05350
Name
(RefSeq) sister-chromatid cohesion protein 3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108222861
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108222861
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SCD
STAG
HEAT_2
Motif
Other DBs
NCBI-GeneID:
108222861
NCBI-ProteinID:
XP_017252299
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Position
5:34236308..34248637
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AA seq
1128 aa
AA seq
DB search
MEEPPVAPATASRRSKRPRVLVYGKSVVDGQSPEHENSFEDFEEPRPKGSKRTRVAGESS
APEPESYNTLIEVIKGNGKHIPRVVKLWVESYEKDPKPAMVELLTMLFEACGAKYRIQGE
FLDETDVDDVVVDLVKLARDGEIEDYQNSKKKEFKNFKDNLVFFWDNLVAECQNGPLYDQ
VLFDKCINFIIALSCTPPRVYRQVASLMGLQLVTSFINVAKVLGAQRETTQRQLNAEMKK
TSDGPRVESLKNRVTVTHENITMVEGMMRKIFTGLFVHRYRDIDPDIRMSCIQSLGVWIQ
SYQSLFLQDLYLKYLGWTLNDKSAGVRKASVLALQNLYEVDDNVPSLGLFTERFYKRMLE
LADDIDISVAVCAIGLVKQLLRHQLVPDEELGSLYDLLIDDPPDIRRAIGALVYDHLIAQ
KFNSSQSHSSGEEDDSSEVHLVRMLKILGEFQEDQILSIYVIDDVWEFMNAMKDWKRIIS
MLLSENSSTELTNEDITNLTWLLCASVKKSVGERIVPATDNRKQYYTKAQRETIEINRKN
ITVAMMKNYPQLLRKYMVDDAKVPLLVEIIVYMNLELYSLKRQEQNFKTVLQLIKDAFFK
HGEKDVLRSCVKAIIFCSSESHGELQDFAQNKLKELEDELIAKLKSSIKEVADGDDEYSL
LVNLKRLYELQLARAVPIDSVYDEIVNTLENFRNMDDEVVSFLLLNMHLHVSWSLHSIVN
NKTIPEASVSSLMTKRTALFAQLEHYLPPLTGSQEESKCGHLLACRVCTILAETWCLFRK
TNFNSTKLEHLGYCPDVSVLRGFWGLCEQQLNISEEAEEEDAKKEYVEETNRDAVMIAAA
KLIATDAVPKEFLAPEIISHFVMHGTNVGEIVKHLISLLKKKDDDISYIFLEALKRAYRR
TMVVMSSSDDVDDISAKLYKDCKDLSARLSGTFVGAGRSKHRADILKIVKDGIEFAFLDA
PKHLAFLDFVVNFVSKLPRPDILEILKDVQKRTENVDTDVDPSGWRPYYTFKDSLQEKYA
KNEDLQADDKPGASIKRRGRPRKKDNIHGKKLFDEQSSSEEEDPISVDDHNDEDEEDQQE
EDEDEEAPLIHSLRASQKLKSLRVSREEKKGQTSAENLAASRTSGASS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccaccggtggctccggcgaccgcatctcgccgttcgaaaagacctagggtt
ttggtgtacggtaagagtgttgttgacggtcagagcccggaacatgaaaattcgttcgag
gattttgaagaaccgcgtccaaaaggtagcaagcgtacacgtgtcgccggagaatcttcg
gctcctgaaccggagagctacaacactctgattgaggttattaaagggaacggaaaacat
attccgcgggtggttaagttatgggttgagagttatgagaaggatccaaaacctgcaatg
gttgaacttctgaccatgttgtttgaggcatgcggagcaaagtaccgcattcaaggagaa
ttcttagatgagactgatgttgacgatgttgtagtagatcttgttaagctggctcgagat
ggggaaattgaggattatcaaaattccaaaaagaaggagtttaagaattttaaagataac
ctagtttttttctgggacaatctagttgctgagtgccagaatggtccgttgtatgatcaa
gtgttgttcgacaagtgcataaacttcataattgcactttcatgcactcctcctagagtt
tatcgtcaagttgcttctttaatggggctccagcttgttacgtcattcattaatgtagct
aaagttcttggtgcacaacgagaaactactcagagacaattaaatgctgaaatgaagaaa
acatctgacggacctcgcgtggaatcacttaaaaatagggtgacagttacacatgaaaac
ataacaatggtagaagggatgatgcgaaaaatatttacagggttatttgtgcaccgttac
agagacattgatccagatattcggatgtcatgtattcagtcacttggtgtgtggatacaa
tcttaccagtccttgttcttgcaagatttatacttaaaatatcttggatggacattgaat
gacaagagtgctggtgtgagaaaggcttctgtccttgctctgcagaacctatatgaggtg
gatgacaatgttccatctcttggtctgtttacagaaagattttataagcggatgcttgag
cttgctgatgacattgatatttcagtggcagtatgtgcaataggactagtcaaacaatta
ctaagacaccagttagttcctgatgaggaattaggttcactgtatgatttactaattgat
gatccaccagatatcaggcgggctatcggggcactagtgtacgatcacttgattgcgcaa
aagtttaatagttctcaatctcattcatcaggtgaagaagatgattcttcagaggttcat
ttagtcagaatgttgaaaatacttggagagtttcaggaagatcaaattctaagtatatat
gtcatcgatgatgtgtgggagttcatgaatgccatgaaggactggaagcgtattatctct
atgctactgagtgagaactcgtcaactgagctgactaatgaagatataactaatcttact
tggcttctatgtgcatctgtgaaaaagtcagtgggtgagagaattgtgcctgctactgat
aaccgaaaacagtattataccaaagctcaaagagaaacaattgaaatcaatagaaaaaat
ataactgtcgccatgatgaagaactacccacagctgttgcgcaaatacatggttgatgat
gctaaagtaccattgctagttgagattatagtctacatgaatcttgagctttattctttg
aagaggcaagaacagaacttcaaaactgttcttcagctcataaaagatgcattttttaaa
catggtgaaaaggatgtccttagatcttgtgtgaaggctataatcttctgttcttctgag
agccatggggagctacaagatttcgcccaaaataaattaaaggaactagaggatgagctg
attgccaagcttaaatcttcaataaaagaagttgcggatggcgatgacgagtactcactt
cttgtgaatcttaaaaggctgtacgagcttcaactggcgagggctgtaccaattgacagt
gtatatgatgaaatagtgaatactcttgaaaatttcagaaacatggatgatgaggttgtc
agttttctacttctgaatatgcacctgcatgtttcttggtccttgcactcgatcgtaaac
aacaaaaccatccccgaggcatctgtttcttcccttatgaccaaaaggactgctttgttt
gcgcaacttgagcattacctaccccccttgactggaagtcaggaagagagtaaatgtgga
caccttctagcctgtcgagtttgtactatacttgcagaaacctggtgtttgttcagaaag
acaaacttcaactcaacaaagttggagcatctaggatactgtcctgatgtttctgttctt
cgagggttttggggactgtgtgaacagcaacttaacatttcagaggaagcggaagaagaa
gatgctaagaaagaatatgttgaggagaccaacagggatgcagttatgattgctgctgcc
aagctgattgctactgatgcagttcccaaggagtttcttgccccagaaattatttctcac
tttgtaatgcatggaacaaatgttggtgagattgttaagcatctgatatcattgctgaag
aaaaaagatgatgatatttcttacatattcttggaagcactgaaaagggcctatcgacga
actatggttgtaatgtcgagtagtgatgatgtagatgacatatctgcaaaattatacaag
gattgcaaagatctttctgctcgactttccggtacttttgttggtgctggtcgaagcaaa
catagagcagatatattgaaaattgtgaaggatggtattgagtttgcttttctggatgct
ccaaagcatttggctttcttagatttcgttgttaattttgtttccaaacttcctagacct
gatattctggagattttgaaggacgtacaaaaacgtacagagaatgtggacacggacgta
gatcccagtggttggcgtccatactacacttttaaagacagcttgcaggagaagtatgcg
aaaaatgaagatttacaagcagatgacaaaccaggggcttccataaaacgtcgtggtcgc
cctcgtaagaaagataatatacatggaaagaaactctttgatgagcaaagttcaagtgaa
gaagaggaccctatcagtgtggacgaccataatgacgaagatgaagaagaccagcaagaa
gaagatgaggacgaggaggctcctttaatacattcacttagagcatcccagaagctcaag
tcactgagagtttcgagagaggaaaagaaaggacaaacaagtgccgagaacttagcagct
tctagaacttcaggggcatccagctag
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