Daucus carota (carrot): 108222927
Help
Entry
108222927 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP1
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
108222927
NCBI-ProteinID:
XP_017252400
UniProt:
A0A164ZD22
LinkDB
All DBs
Position
5:35127744..35137293
Genome browser
AA seq
1232 aa
AA seq
DB search
MAIASEGETSYRGGAGGKFQKRPARRHQTTPYDRPPSIVRNPRPGGWVSKLFDPASRFIS
ARAFKFFSNFRKRITESEQEAKDVPQEATPTLVDCKGTRERDIACNGDINNSFEGSGISD
LEQMLQQKTFTRSEIDRLTELLRSRTMESSNQDKEKTNEGNLYKSVSDVEKHNVSMRSPL
QEKRDDGIKLQRDVTVTGVGAKVLEDDIASPAELAKAYMGRSSKVSPSMLGARSQAFKEE
TPLLNHGVYPSKSSALSLVSKSLLREGVPEKSFATPRSRGRSAIYNMARTPYSRGAASTN
YIYAGPSSSSSSPQSVWEHNGQSGSKQLALKRRSSVLDDDSGSIGAIRRIRQKPNLLYNT
SPLPTRGTDLGRSAGQNHISSSDKPLLLDDAKNQVSKNREESEDDSIAGFRYPLVNSQSR
QMASKILQQLEKFTPQKSSESKMTTARDKSPIKLTSNMLRGQALRSLENADSTQYLQKQD
AGKLEDSSNALQDAGGQVSQKKVIVEENGFKESNITLKSIASSSDANGASSMTNAAPNVK
NGDSNVSKFAAQPPQKKRAFRMTAIEDFADLDDETYTNGFASGERTEELQIVSKSVSPQD
KGIEKILTKAEGKIPEKLTSNSTSDHKLFGGLAAAKENTGFQTPVVASISNFKQDVNDQS
TSVVNNSVPSRDTSGSPTLSGLSSKNVNALPSFTFSASPFGESSGSIPTWSDPSQQALNS
FGNDTQLRTKESDKVNAKSPEKLGQVSWPSDNSTPVAVKASTASALVPSCVPSETLNNGL
ADSKPSSDISPPKPPSSNSTEQVLGNSSTTTHSLTSAAMTSGSTSISSPSIFAVKPPSFT
TAPAASPPLFSSEPVASPVFSFEPSKPKSSPATTVSTVTGADTTEMKSSEGTLISSSDKP
PSGSMFATTNAGNNPFGFSSSFAASSSSSAVNTQLPPKSGAPAVTQSVPFQFGSSGSSTI
FGTSGTSFTTNVSVTASSISPANPFGSGTTSLSTTSSPFSAVSPANALGSSASSPSPSPF
FSFGASTTASTPMVFGQSTGTSVSTFSFTSPTSTTSSMPSLSQSKPVFGSAAAVRSPGNN
GDQMNMEDSMAEDPVHSSNPAVPVFGQSLVSPSNSTVPVFGQATVTSSNAAVPVFGQQLV
SPSNPTVPAFGQSLVSPSPPGFMFGSAAPSSISSSPFQFGGQQNQAAPQNLPSFPASNSL
VNSGGSFSLGSGGGDKGGRKMVRVSKNKNRRK
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagcgagcgaaggcgagacctcctatcgtggcggagctggaggcaaattccag
aaacggcctgctcggaggcaccaaacgacgccgtatgatcggccgccgtcgattgttcga
aaccctagacccggcgggtgggtctccaagctttttgacccggcttctaggtttatttct
gcgagagctttcaagttcttctccaattttcgtaaacgaatcacagaatcagagcaggaa
gccaaggatgtacctcaggaggcgactcccacgttggtagattgtaaaggaacgcgtgaa
agggacatagcttgcaatggggatataaacaacagctttgaaggcagtggaatatcagat
cttgaacaaatgctacagcagaagacttttaccaggtctgaaattgatcgtttaactgaa
ctattacgctcaaggacaatggaatcttcaaatcaggataaggagaaaacaaatgaaggg
aacctatataaatctgtatcagatgttgaaaaacacaatgtgtcaatgagaagcccattg
caagagaaaagggatgatggtattaaattacaaagggatgttactgttactggtgttggt
gcaaaggttcttgaagatgatatcgcctcacctgcagagctagcaaaagcctacatgggt
aggtcttccaaagtatcaccgtcaatgttgggtgctcgttctcaagcttttaaggaagaa
acacctttgctcaatcatggtgtatatccttcaaaatcatctgcactatcgctagtctca
aagtcgctgctgcgtgaaggggtacctgagaagagcttcgctaccccgagatctcgggga
agatcggcaatatataacatggcccgaacaccatattctaggggtgctgcgtctacaaat
tacatttatgctggaccctcctcctcctcctcatctcctcagtctgtctgggagcataat
ggacaatcagggtctaaacaattggcactaaagcgaagaagttctgtattagatgatgat
agtggatctattggtgccatacggagaattagacaaaaacccaatctgttgtataacaca
agtccactgcccacgcgtgggactgatcttggtcgtagtgctggtcaaaaccatatatct
tcgtcagataaacctctcctgctggatgatgctaaaaatcaagtctcaaaaaatagagaa
gaatcagaggatgatagcattgctggattcagatacccccttgttaattcacaatcccgt
cagatggcgtctaaaattttgcaacaacttgagaagtttaccccacagaaatcatcagaa
tcaaaaatgactactgccagggataaatcacctattaagttgacttctaatatgcttcgt
gggcaagctcttagaagcttggagaatgcggattcaactcaatacctacagaagcaagac
gctgggaagttggaagattctagcaatgcattgcaggatgctggtggacaagtctcccaa
aagaaagtcattgttgaagaaaatggctttaaagagtcaaacattactctgaagtctata
gcttcttcttcagatgctaatggtgcaagctccatgacaaatgctgcacctaacgtaaag
aatggagattctaatgtttcaaaatttgcagcacaacctcctcaaaagaaacgtgctttt
cgcatgactgcaatcgaggatttcgctgacctggatgatgaaacttatacaaatggattt
gcttctggtgaaaggacagaagaattgcagatagttagcaagtctgtttctcctcaagac
aaaggaattgagaaaattttgacgaaggcagaaggaaagatacctgagaagctgacatca
aatagtactagtgatcataaactttttggtgggcttgcggctgccaaagaaaatactgga
ttccagactcctgtagtggcttccatctcaaatttcaagcaagatgtgaatgatcaatca
acttcggtggttaacaattctgtgccatctagggatacaagtggctctcccaccttgtct
ggtctgagttcaaaaaacgtgaatgcacttccatcttttacattctctgcatcacctttc
ggtgaatcgtcaggttcaatccctacttggtctgatccaagccaacaagccttaaacagc
tttggcaatgatactcagctgagaactaaggaatctgacaaagttaatgctaagagtcct
gaaaagttaggacaggtgagctggccttcagataattcaacacccgttgctgttaaagct
tccacagcaagtgcgttagttcccagctgcgtaccttctgaaacattgaataatggacta
gctgattcaaaaccttctagtgatatatcacctcctaagccgccttcaagtaattctaca
gagcaagttcttggaaatagctctaccactacccactctctaactagtgctgccatgaca
tctggtagtaccagcatcagcagcccgtctatatttgctgtgaaaccaccctcatttact
acagcacctgctgcatcaccccctttgttttcttcagaacctgttgcatcacctgttttc
agctttgaaccatcaaagcccaagtcaagtccagctacgacagtttcgactgtcacaggt
gcagataccacagagatgaagtctagtgagggaacgcttatcagcagttcagacaaacca
ccttctggtagcatgtttgcaacgacaaatgcaggaaacaacccttttggattcagctct
tcatttgctgcttcttcttcttcgtccgcagttaatacacagttgccgcctaaaagtggg
gcgcccgcagtaacacagagtgttcccttccagtttggttcatctggctcatcaacgata
tttgggacatcagggacatcattcaccaccaatgtatctgtgacagcttcatcaatttct
cctgcaaatccatttggctcaggaactacctcactcagtactaccagttcccctttttcg
gcagtttctcctgcaaatgcattgggctcatctgcaagttcaccatccccatcccctttt
ttctcctttggagcatcaactacagccagtacaccgatggtgtttggacaatccactggt
acttcagtgtctactttctcatttacttcacccacttctacaacttcatctatgccgtct
ttatcccaatcaaaacctgtatttggaagtgcagctgctgtcagatcccctggaaataat
ggtgatcagatgaacatggaagatagtatggcggaggatcctgtgcattcatctaatcct
gctgtaccagtctttggccaatcattggtctctccttcaaattctactgtaccagtgttt
ggccaggcaactgtcacttcatccaatgctgctgtaccagtatttggccaacaattggtc
tctccatccaatcctaccgttccagcatttggccaatcattggtctcaccatctccgcct
ggcttcatgtttggttctgcagctccttcgtcaatatcctcatcaccctttcagtttggt
ggtcagcaaaatcaagccgctccacagaacctaccttcatttccagcatctaatagtcta
gttaacagtggagggagtttctcattgggatctggtggtggagataaaggtggtcggaaa
atggttcgggtcagcaaaaacaaaaataggaggaagtag
DBGET
integrated database retrieval system
