Daucus carota (carrot): 108223484
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Entry
108223484 CDS
T05350
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108223484
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108223484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
108223484
NCBI-ProteinID:
XP_017253265
UniProt:
A0A164XB62
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All DBs
Position
5:complement(1086035..1092404)
Genome browser
AA seq
687 aa
AA seq
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MASYRPFPPPPQSTFVAQPPPPNQNPLAPPQSRGGSTQYSQNWGDGSSYQQGYQSNTSFQ
QPHYGAPPRSQVPVGLPPQHQQQQYPYPPPPPPESSYPPPPPPLAQNSKPLQPPMYYPSS
QYSQYNNQPMQPSQPPPPSSPPSLNAPPPPPPPSSPPPPPPTQSKEIKVETSDRGAKKDG
TLNQGLFSRQHKPSIPVAPGRRSNGPPGRVETEEERRLRKKKEYEKQRQEDKHRQQLKDS
QNKVLHKTQMLSSGAKMPASITGSHMGDRKATPFLSADRIENRLKKPTTFICKMKFRNEL
PDPTEQRKLMTLKRDKDRLSKYRITALEKLHKPQLYVEPDLGISLDLLDLSVYNPPKGEI
LYLDPEDEALLRDDDPITPIKKDGIKRKDRPTDQGVSWLVKTQYISSVNMDSTKQSLTEK
QAKELRDRQRGRGILDSSNNRGRRIQEIKSSFEACKTRPVHSTNKSLQPLEVLPLFPDFE
RYDDRFVIANFDSAPTGDSEVYQKLEKSVRDAHESQAIMKSYRVTGSDNAEEEKFMGYMA
PSLDELSKDMYDENEDISFTWVREYHYDVRGEDAADLTTYLVSFGESAAGYVPLPAKLVM
RKKRAREGKSTDEIEHFPAPSAVTVRWRADVSVGEVIESKSYSGARGSASTSKRQRIYNG
STSRQRNVSHHERDYSSGAEDDLNDDI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatcggccattcccaccacctccgcagtctacttttgtggctcagcctcct
cccccgaatcagaacccgcttgcgcctcctcaatcacgaggaggatcaactcagtattcg
cagaattggggtgatgggtcttcttatcagcaaggttatcagtctaatacgagctttcag
cagccacattatggggctcctccaagaagtcaggttcctgtaggtcttcctcctcaacat
caacaacagcagtatccgtatcccccaccgccgccacccgagtcttcttacccgcctccc
ccacctcctttggcccaaaattcaaaacccctccaaccgccaatgtactatccatcttca
cagtactcccaatacaataaccagcctatgcagccatcgcaaccacctcctccttcgtct
cctccaagtttaaatgctcccccacctcctcccccaccgtcttcacctccacctccacct
cctactcaaagcaaggagattaaagtagaaacaagtgataggggggctaaaaaggacgga
actttaaatcaagggttgttctccagacaacataagccatctattcccgttgcaccagga
agaagatcaaatggtcctccggggagggttgagacagaggaggagaggagattgcgcaag
aagaaggaatatgaaaaacaaagacaagaagacaagcacaggcagcagttaaaagattct
caaaataaagtgctgcataagacccaaatgttatcctccggagcaaaaatgcctgcatca
attactggttcacatatgggtgacagaaaggccacaccatttctgagtgcagaccggatc
gaaaatcgattgaagaaaccaacaacgtttatctgcaagatgaaattccgcaatgaacta
ccagatccgacggaacagcgaaagcttatgacactgaaaagagataaagatcggttatca
aaatatagaattactgctttggaaaaactacacaagcctcaattatatgtcgagccagac
ctcgggatttctcttgatctgcttgatcttagtgtgtacaatcctccaaagggggagatc
ctttaccttgatcctgaagacgaggcattgttgcgggatgatgatcctataactccaata
aaaaaagatggcattaaaagaaaggatcgccctactgaccaaggggtttcctggctggtg
aaaacacaatatatctcttctgtcaatatggattccacaaaacagtctctcactgaaaag
caagcgaaagaactgagagaccggcaaagagggcgcggtattcttgatagttcaaacaat
agggggaggagaatccaagagattaagtcttcatttgaggcatgcaagaccaggcctgtg
cattcaactaataaaagtttacaacctttagaagttttgcctctgtttcctgattttgag
aggtatgatgaccggtttgtcattgcaaactttgatagcgctcctactggtgattcagaa
gtctaccagaagttagagaaatcagttcgtgatgcccacgaatctcaggccattatgaaa
agttatagggtgacaggttcagacaacgccgaggaagaaaaatttatgggctacatggct
ccttctcttgatgagctttccaaagacatgtatgatgaaaatgaagatatatcattcaca
tgggtccgcgaatatcactatgatgtacgtggtgaggatgcagcagatttgaccacatac
ctcgtctcgtttggtgaatcagcagcaggctacgtgcctcttcctgccaaacttgtcatg
aggaagaagagggcaagagaagggaaatcgacagatgagattgaacattttccagcaccc
tctgcggttactgtaagatggagagccgatgtttctgttggagaagtgattgaatcgaag
agttactcaggcgccaggggtagtgcttcaacatccaaacgtcaaagaatatataatgga
agcacttcaaggcagcgcaatgttagtcaccatgaaagagattattctagtggagctgag
gatgacttgaatgatgatatttga
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