Daucus carota (carrot): 108223632
Help
Entry
108223632 CDS
T05350
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108223632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108223632
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
SR proteins
108223632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108223632
NCBI-ProteinID:
XP_017253465
UniProt:
A0A164YHB4
LinkDB
All DBs
Position
5:complement(28547457..28551191)
Genome browser
AA seq
331 aa
AA seq
DB search
MPRYDDRYGGDRYGTTTRLYVGHLSSRTRSRDLEHIFSRYGRVRDVDMKHDYAFVEFSDP
RDADDARYSLNGRDIDGSRLIVEFAKGVPRGPGGTREYMGRGPPPGSGRCFNCGLDGHWA
RDCKSGDWKNKCYRCGERGHIERNCTNSPKKLSRRGRSYSRSPVRSRSRSPRRGRSRSRS
FSRSRSYSRSRSPQKRERKTDRVKGSRSPRYSSRSPDIKNSPPPKARKRSPTPEDASPFG
RGSLSPGMDKIATEQDGSDYGESPRARTPRSASPVSPIRGSPVANRDESPLEANGGANGM
SRSPSPREDRSPMDDVDDEKPQSFRGGSESS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatatgatgatcgatatgggggtgaccgatatggtacaacaacacggctgtat
gttggccatttgtcctcacggacacgatcacgtgatctggagcacatctttagcagatat
gggagagtacgggatgtggatatgaagcacgactatgcctttgttgagttcagtgatccg
agagatgctgatgatgcaagatatagcctcaatggtcgtgacattgatggcagtcgtctt
atagtggagtttgctaaaggggtgccccgtgggccaggtggtaccagagaatatatgggc
agaggtcctcctcctggatctggacgctgcttcaattgtggccttgatggtcactgggct
agggattgcaaatcaggtgactggaagaacaaatgctaccgttgtggtgagagaggtcat
atagaaaggaactgtactaacagtcctaaaaagctaagtcgacgtggtagaagttactca
aggtcaccggtgagatcaagatcacgttcacctcgccgtggaagaagccgtagtagaagt
ttcagccggagtcgcagctacagtcgatcaaggtctccccaaaagagggaaaggaagaca
gaccgtgtgaagggatccaggagtcctcgctatagcagcaggagccctgatataaaaaac
tctccaccccccaaggccaggaagcggagcccaactccagaagatgccagcccatttggg
agaggtagcctttccccagggatggataaaatagctactgaacaagatgggtctgactat
ggtgaaagtcctagagctaggactcctagaagtgcgagtcctgtgagtcccattagaggg
agtcctgttgccaacagggatgagagtccgttggaagctaatggaggagccaatgggatg
agtcgcagtcctagtcctagagaggacagaagtccaatggatgatgttgatgatgaaaag
cctcaatcattcagaggcggcagcgagtcatcctag
DBGET
integrated database retrieval system
