Daucus carota (carrot): 108224812
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Entry
108224812 CDS
T05350
Name
(RefSeq) UPF0400 protein C337.03-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108224812
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108224812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Med8
Fib_alpha
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
108224812
NCBI-ProteinID:
XP_017255030
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All DBs
Position
6:19614045..19619809
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AA seq
472 aa
AA seq
DB search
MGSTFKPHILVEKLVKLNSSQQSIETLSHWCIFHMNKAKNVVETWDRQFHCSPREQRLAF
LYLANDIIQNSRRKGSEFVAEFWKVLPGALRVVLEIGDKSERNAAMRLINIWEERKVFGS
QGQLLKDELVGKNLNISNNPPVFKLTNAAGNALEKIASAYQVLYGGQLDEETILHNCMNS
IRYIEKVEKEIGGGISSEKLIQSGTVEEIRGQQAILMGCIEQLRDVQSCRISLVSYLTEA
LHEQEVKLSHLRHQLQDAESQSEQAENLCRHIINTVHSLAEKKDSHNNSEASQCLTDDIE
VQTAPVMYTKQVQYNEKLYHSAENSKSAVAGPAAPVTATTSAAQVLPYVLPAVASDGVIV
NTVKGPSDDYPLEKKLKLESGHSVYLQSEIPQPPVPPYPHPDSLQHHVAITSNELAPQVQ
PPLPLSPPPMPPLPPSNPFQVPQFMPNVGSMATAPAPYSYGLIQQLPPPPFP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcacatttaaaccgcatattttggtggagaagctggtcaagctcaacagttca
caacaaagcattgaaactctgtcccattggtgtattttccacatgaacaaagcaaagaat
gttgttgaaacgtgggacaggcagtttcattgctcaccgcgtgaacagcggttggctttt
ctgtatcttgcaaacgatattatccaaaatagcaggcgaaagggttcggagttcgttgct
gagttttggaaggttctgccaggtgcacttcgtgttgtacttgaaatcggagacaagtct
gaaaggaatgctgcaatgcggctgattaacatatgggaagaaagaaaagtctttggctct
caaggtcagcttctcaaagatgagcttgtagggaagaacctaaacataagcaacaatcct
ccagtattcaaattgacaaatgcagctggaaatgctctggaaaaaatagcatctgcttat
caggttctttatggtggtcaactagatgaagaaactatcttgcataattgtatgaattct
attagatacattgaaaaagtagagaaggaaattggcggtggtataagctcagagaaactc
atccaatctggcaccgtggaggagattagggggcagcaggctatactgatgggttgtatt
gaacagcttagggatgtacagtcttgcaggataagccttgtctcttatcttacagaggct
cttcacgaacaggaggtaaagctaagtcatcttcgacatcaactacaggatgcagaatct
cagtcagagcaggccgaaaatctttgcagacatattataaacactgttcattctctggct
gaaaagaaagattcacataataactcagaggcatctcaatgtttaacggatgacattgaa
gtacaaactgctccggtgatgtacacaaaacaagtgcaatataatgagaaactttaccac
agtgcagaaaattctaaatctgctgtagctggaccagcagcccctgtgactgcaaccaca
tccgcagctcaggtgctaccttatgtcctacctgctgttgcatcagatggggtcattgtc
aacacagtgaagggaccttcagatgattatccacttgaaaaaaagctgaagcttgagagt
ggtcactctgtttacctacaatctgagattcctcagccacctgttccaccctatccgcat
ccagactcattgcagcatcatgttgcaatcacctccaacgagttggctccacaagttcaa
ccaccacttccattatctcctccacctatgccaccactaccaccttcaaatccatttcaa
gtacctcagttcatgccgaatgtagggtcgatggctactgcacctgcaccatatagctat
ggcttaatccaacagctgccgccgccaccctttccctaa
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