Daucus carota (carrot): 108227627
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Entry
108227627 CDS
T05350
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
dcr03013
Nucleocytoplasmic transport
dcr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108227627
03008 Ribosome biogenesis in eukaryotes
108227627
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108227627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108227627
03009 Ribosome biogenesis [BR:
dcr03009
]
108227627
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108227627
03036 Chromosome and associated proteins [BR:
dcr03036
]
108227627
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108227627
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108227627
Pre-60S particles
108227627
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108227627
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108227627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
108227627
NCBI-ProteinID:
XP_017258360
LinkDB
All DBs
Position
6:31697562..31710353
Genome browser
AA seq
1078 aa
AA seq
DB search
MEIASEKLRDLSRPIDVPLLDATVAAFYGTGSKEERNAADHILRELQTNPDMWLQVVHIL
SNTQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVKLSSDEISFRRERLYV
NKLNIILVQILKHEWPTRWQSFVPDLVAAAKSSETICENCMAILKLLSEEVFDFSRGEMT
QQKIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLATLHAFLSWIPLGYIFESTLL
ETLLKFFPTPAFRNLTLQCLTEVAALSFGDFYNSQYAKLYGIFMLQLQAVVPSSSKIPEA
YANGSSEEQAFIQNLALFFTSFFKCHIRVLEATQENITALLAGLEYLIDISYVDDTEVFK
VCLDYWNSLVSELFEAHHNMYNPLATGSIIGLQMPLLNRVAGGLGSEILQRRQLYAMPMS
KLRLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEK
QMLRKLSKQLNGEDWTWNNLNTLCWAIGSISGSMMEDQENRFLVMVIRDLLNLCEVTKGK
DNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQK
CRRKFVIVQVGESEPFVSELLTTLPTTIADLENHQIHSFYESVGNMIQAESDPQKRDEYL
QRLMELPNQKWAEIIGQARQSVELLKDPDVGRAVLNILQTNTSVAASLGTYFLPQISLIF
LDMLNVYRMYSELISASIAEGTPYTSKSSYVKLLRSVKRETLKLIETFLDKAENQPQIGK
QFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIEDVPHIFEASFQCTLEMI
TKNFEDYPEHRLKFFSLLRAIATHCFKALILLSSEQLKLVMDSIIWAFRHTERNIAETGL
NLLLEMLKNFQATDFCNQFYRSYFLTIEQEIFAVLTDTFHKPGFKLHVAVLQHLFCLVDS
GSLTEPLWDASTVAYPYSSNAMFVREYTIKLLGSSFPNMTVAEVTQFVSGLYESRADLST
FKNHIRDFLVQSKAFSAQDNKDLYAEEAAAQRERERQRMLTIPGLIAPNEIQDEMLDS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggagattgcttcggagaagctgagggatttaagccggccgattgatgtgccgttgctc
gatgctactgtcgctgctttctatggaactggatctaaagaggagaggaatgctgcggac
catatattgcgagagttgcaaacaaatcctgatatgtggctccaagtcgttcacattctt
tcaaatacacagaatctcaacaccaagttttttgctttgcaggttctggaaggtgtaatc
aaatataggtggaacgctctgcctgttgagcaacgagatggaatgaagaactacatctct
gatgttattgttaagctttcaagcgatgaaatctcctttcgccgggaaaggctgtatgtc
aacaaacttaatattatattggttcagatcttgaagcatgagtggcctactcggtggcag
agctttgttccagatctggttgcagcagcgaagagtagtgaaacgatttgtgagaattgc
atggccattttaaagctattaagtgaagaggtatttgatttctcaaggggtgaaatgact
caacagaagattaaagagctcaaacagtcattgaacagcgagtttcaactcatccacgag
ttatgcttgtatgtactatctgcatctcaaagagcagagcttatcagggctacgcttgcc
acactgcatgcatttctttcttggatacctcttggatatatcttcgagtctactctgctg
gaaacacttcttaaattcttccccacgccagcgtttcggaatctgactctccagtgtttg
acagaggtagcagctcttagtttcggagatttctataatagccagtatgctaaattgtat
ggcatattcatgctacaattgcaggctgttgtcccttccagttcaaaaatacctgaagcc
tatgcaaatgggtctagtgaggaacaggcattcattcagaacttggcgttattcttcacc
tcgtttttcaagtgccatatacgagttcttgaggcaacacaggaaaatattactgctttg
cttgccggtctagaatatctcattgacatttcatacgtggatgatactgaagtttttaag
gtgtgcttggattattggaactccttggtatcagagctcttcgaggcacatcataacatg
tataatcctttagcaacaggaagcataattggactgcagatgccattgcttaatcgtgtt
gccggtggtcttggctcggaaattttacagcgccgccaactttatgcgatgccaatgtcc
aagttgagattgcttatgatatgtcgcatggcaaagcccgaggaggttctaattgttgaa
gatgagaatggtaatattgtccgtgaaactatgaaagacaatgatgtcctcgtgcaatac
aagataatgagggaaacacttatctacttgtcccatcttgaccatgaagatactgagaag
cagatgctgagaaaattgagcaaacaactaaatggagaggattggacttggaacaacctg
aacacattatgttgggcaattggatcaatatctgggtccatgatggaagatcaggaaaat
agatttctcgttatggtgattcgggatttactgaatctatgcgaagtaacaaaaggaaaa
gacaacaaagctgttattgctagtaacattatgtacgtggttggccagtacccaaggttt
cttcgtgcccattggaagtttctcaaaacggttgtcaacaagttgtttgaattcatgcat
gaaacacatccgggagttcaggatatggcctgcgatacttttttgaaaatcgttcagaaa
tgcaggcgtaaatttgttattgttcaggttggggagagtgaaccgtttgtgtcggaactt
ttaacaacacttcctacaaccattgcagatcttgagaatcatcagattcattcattttat
gaatctgttggtaatatgattcaagcagaatctgacccccaaaagagagatgaatatctg
cagaggctaatggagcttcctaatcagaaatgggctgagattataggccaagcacgtcaa
agtgttgaattactaaaggacccagatgttggccgggctgtgcttaatatattgcagact
aatacaagcgttgctgcctcccttggaacttatttcttgccacaaatttctctgatcttt
ctggacatgcttaatgtgtatcgaatgtatagtgagctcatatcagccagcattgctgaa
ggaacaccttatacttcgaagtcatcttatgtcaaactcttacgttctgtaaagagagaa
actcttaaactcatcgagacatttctagacaaggcggaaaatcaaccacaaattgggaag
caatttgtgcctcctatgatggaccctgttcttggtgattatgctcggaatttgccagat
gctagagaatctgaagttttatcactttttgctacaataataaacaagtacaaagctgca
atgattgaggatgtccctcacatatttgaagcttcttttcagtgtacacttgagatgatc
acgaagaattttgaggactaccctgagcatcggcttaagttcttttctctgctccgtgca
atcgctacacattgtttcaaggcattaattcttttgtcaagcgagcaacttaaacttgtt
atggattcgataatatgggcattccggcacacggaaaggaatatagctgaaacagggctt
aacctattgttagagatgctgaagaatttccaggctacagacttctgcaaccaattctat
cgcagttacttcttgactattgagcaggaaatttttgcggtcctaacagacacatttcat
aaacccgggttcaagttgcatgtggcagtgcttcagcacttgttctgcctggtagattca
ggttcattaaccgaacctttgtgggatgcatcaacggttgcttacccgtattcaagtaat
gctatgtttgttcgtgagtacacaataaagctgttgggctcatcattcccgaatatgaca
gttgctgaggtgactcagtttgtcagtgggttgtatgaatcaagagctgatctttccaca
tttaagaaccacatacgagacttcctcgtccaatcaaaagcattttcagctcaggataac
aaggatctttatgcggaagaagctgctgctcagagagaaagggaacggcaacgaatgctt
acaattccagggcttattgcacctaatgagatacaagatgaaatgttggattcgtaa
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integrated database retrieval system
