Daucus carota (carrot): 108227849
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Entry
108227849 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase XBAT33 isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108227849
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108227849
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108227849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
108227849
NCBI-ProteinID:
XP_017258701
LinkDB
All DBs
Position
6:complement(37228180..37234378)
Genome browser
AA seq
508 aa
AA seq
DB search
MGNSFGCSASGERLISAARDGDFVEAKMLLDCNPCLAKYSTFGGLNSPLHFASAKGHNEI
VALLIENGADVNSRNYCGQTALMQACRYGHWEVVQTLLLFRCKVTRGDYLSGRTALHFAA
VNGHVRCLRLVVADFVPSSPYDSINGQANGGDASNCRNKPDQSALTKFVNKAADGGITAL
HMAALNGYFDCVQLLLNFQANVSAVTFDYGTSMDMIGAGSTPLHYAACGGNLKCCQILLA
NGASRSMLNCHGCLPLDVAKTWGRHWLEPLLTPNSELTVPVFTPSNYLSLPLMSILNIAR
EFGLQSSATTDDTDNCAVCLERPCTVAAEGCRHELCVRCALYLCSTSNIGSELLGPPGSI
PCPLCRHGIISFTKLPGSQAKEIKLNMSLGLCTPCMIHTRESNHLTPACTPEIRKNRVAS
VSSDIFCPVTCSPFPSVAIPMCTCNDGSCPSFEPREGATEDESSRSQSPSVDEDKMLTVR
PERTSCSKMFWSRRSCSREQQCNSEINS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggtaattcatttgggtgctcagcttctggagaaagactgatctcagcagctagagat
ggtgattttgttgaagccaagatgcttcttgattgcaatccttgtcttgctaaatactcc
acctttgggggcctcaactctccccttcactttgcttctgctaaaggccacaatgagatt
gttgcattgttaattgagaatggtgctgatgtgaattcaagaaattattgtggccagaca
gcattgatgcaagcttgtagatatgggcactgggaagttgttcaaactcttcttttgttc
agatgtaaagttacaagaggggactatcttagtgggaggactgctctccattttgcagcc
gtcaatgggcatgttagatgtttgagactggtggtagctgattttgttccgagttcccct
tatgattctataaatggtcaagctaatggcggtgatgcttccaactgcagaaacaaacct
gatcagagcgccttgacaaagtttgtaaataaggctgctgatggtggtatcactgctctt
cacatggctgcactgaatggctatttcgattgtgttcagctactgttaaatttccaggcg
aatgtttcagccgtcacatttgattatggaacgtcaatggatatgataggagcagggagc
acccccttgcattatgcggcttgtgggggaaacttgaaatgttgtcagatcctccttgca
aatggtgctagtcgttcaatgctaaattgccacgggtgcctcccacttgatgttgctaag
acatggggacgtcattggctcgaaccactgttaacgcctaattctgagttgacagttcca
gtgttcaccccttcaaattatttgtcattgccactcatgagtattcttaacatagcaaga
gagtttggtctgcagtcttcagcaactactgatgatactgacaattgtgctgtttgcttg
gagaggccatgtactgtagctgctgaaggctgcaggcatgaactttgtgtaagatgtgca
ctttatctttgctccacaagcaatattggttctgaactattaggtcctcctggctccatc
ccatgtcctctttgtcgacacggtatcatctcttttactaaattgccgggttctcaagca
aaagaaattaaactaaacatgtctctcggcctatgtaccccgtgcatgatacacacccga
gaatcaaatcatttgacaccagcttgcacccctgaaattcgaaagaatcgtgtagcttcg
gtatcttcagatatattttgtccagttacctgtagcccgtttccttcggttgcaattcct
atgtgcacctgcaatgatggatcatgcccatcttttgaacctagagaaggtgcaaccgaa
gatgaatcttctcgctcacaatctccatctgtagacgaagataagatgttaacagtgaga
ccagagagaactagttgctcaaaaatgttttggagcagaagaagctgtagcagggagcaa
caatgcaattctgaaataaactcttga
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