Dendrobium catenatum: 110106292
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Entry
110106292 CDS
T05027
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110106292
03041 Spliceosome [BR:
dct03041
]
110106292
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110106292
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110106292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
PHM7_cyt
Nup35_RRM
DUF1635
Motif
Other DBs
NCBI-GeneID:
110106292
NCBI-ProteinID:
XP_020691803
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MNQRIKQQQQQQQQQQQALMQQALMQQQQQQLYHSGVLAAISQMEPVPSGNLPPGFDPST
CRSVFVGNIHPQVTEALLSEVFQNMGPLEGCKLIRKEKSSYGFVDYHDRRSASLAIMTLN
GRLLYGLPIKVNWAYASGQREDTSGHFHVFVGDLGSEVTDSMLFNHFQVYPSCSDARVMW
DNKTGRSRGYGFVSFRNKQEAQNAINEMSGKWLGNRQIRCNWATKNSVEEKQGSDDQNAL
HLTNGISSNEGAQENSNDDAPENNPAYTTVYIGNLAYEVTQAELHRQFHNLGAGVIEEVR
IQRDKGFGFVRYHTHNEAAAAIVMANGKIVCGKSIKCSWGNKPTPPGTTSTPLPPPGPPF
QLLGAHGYSDADLLAYQRQLAISQAAALPLAAQHSLSSAQSSTGLIPGGSQTVYDGYPSH
TSSQQLMYYS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaggataaagcagcagcaacaacagcagcaacagcagcagcaagctctgatg
cagcaggctcttatgcagcagcagcagcagcagctctaccattccggcgtactcgcagcc
atatcacagatggagcctgttccaagtggcaatctcccccctggttttgatccatctact
tgccgcagtgtgtttgtgggcaatatccatccccaagtcacagaagctcttctttcagaa
gttttccaaaatatgggtccacttgaaggatgcaaactcattcgaaaagaaaagtcttct
tatggtttcgttgattatcatgaccggaggtctgcatcccttgcaattatgaccttgaat
ggacgtcttctatatggtttgccaattaaggtgaattgggcttatgcaagtggtcaacga
gaagatacatctgggcacttccatgtttttgttggtgatcttggctcagaggtcactgat
tcaatgcttttcaatcattttcaagtttatcccagttgttcggatgcacgtgtcatgtgg
gataacaaaactgggcgttctagaggatacggctttgtttcttttcgcaacaagcaggaa
gctcagaatgcaattaatgaaatgtcaggtaaatggcttggtaatcggcaaataagatgt
aactgggcaaccaagaattctgttgaggaaaagcagggtagtgatgatcaaaatgcgttg
catttaacaaatggtatctctagcaatgagggagctcaggagaattcaaatgatgatgct
ccagagaacaatcctgcctacactactgtatatattgggaacctggcttatgaggtgaca
caagctgaacttcatcgccaattccacaatcttggtgctggtgttattgaggaagtgcgc
attcagagagataaaggatttgggtttgtgaggtatcatacccacaacgaagctgctgca
gctattgtgatggcaaatggaaagatcgtttgtgggaaatccataaagtgttcttggggc
aacaagcctaccccacctggtacgacttcaaccccactgcctcctccaggacctcctttc
cagcttttaggggcacatggatattcagatgcagatcttttggcatatcagcgtcagttg
gccataagccaggcagctgcactgcccttggctgcgcagcatagcctttcttccgcccaa
tcatcaacaggcctcatccctggcgggtctcagacggtctatgatggctatccaagccac
acatcctctcagcagctgatgtactacagttag
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