Dickeya parazeae: Dd586_2097
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Entry
Dd586_2097 CDS
T01138
Name
(GenBank) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ddc
Dickeya parazeae
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Dd586_2097
Enzymes [BR:
ddc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Dd586_2097
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
SdrD_B
CarbopepD_reg_2
SpaA
DUF1455
Motif
Other DBs
NCBI-ProteinID:
ACZ76952
UniProt:
D2C043
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Position
complement(2383088..2384800)
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AA seq
570 aa
AA seq
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MQSRKMLIAISILGSSLAQAASPSDVSVGLSGMKAQIDNGLVSVAIGSDGSIGTLSNGSQ
NLIDKANSQVNALGKSSTGYLDYYSGAFLKFKPQQISVIENTKDIVHIAYIDNETSALSL
EYHFIVRRGVSGIYSYAVARNDTSSNLTVSELRGVYRFNPFLLDHISNGIHTTKPYLYSQ
LNNFEKIQDETWKLPDGSYYSKYDFAGYMRKTPVWGVYGNNIGAWIVPGSTEYMSGDDTK
QDLMVHQDGLAIMYMTGSHFGTPDLIAPPGWQKLYGPWLLYVNAGTDEQMYSDALARSLQ
EIASWPYNWVNDSRFSVDRASVTGSVNTTVPLNVTLSSSLNEASDVQTLGYAFTTNTDSQ
GNFRFDKVRKGKYTLTIYANGGSRPGVLYSDVVNVTGNTPIPAIQLAQAAPVVWAIGQSD
RLASEFRFGDQLRNYHWQNDVPANLTYTIGESSPAQDWYYAQTNPGSWNVNYIDRADGSS
RVLNVAFAAASNRGMTNPTTPSLSVLVNGTKVKDIQYDNDKSVYRGALNSGKYHYERIPI
DSGLLRDGTNTITFTLNGGTFMYDAVTLTK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagaaaaatgcttatcgcaatcagtatactcggttcctcactggcgcaggcg
gcatcaccgtctgatgtcagtgtggggctttccggcatgaaagcacaaatagataatggg
ttagtttccgtcgcgattggcagcgatggcagtattggcacactgtcaaacggcagtcaa
aatcttatcgataaagccaatagccaggtgaacgcgctgggtaaaagcagtaccggttat
ctggattattattcaggcgcatttctgaagtttaaaccacagcagatttctgtgattgaa
aacacgaaagacattgtacatattgcttatatcgataatgaaaccagcgcattgagtctg
gaataccattttatcgtacggcgtggtgtcagcgggatttatagctatgccgtggcacgt
aacgatacatcatccaatctgacggtgagcgaattacgcggggtgtaccggtttaatcct
tttctgctggatcatatctccaatggtattcataccaccaaaccttacctctactcccag
ctcaataactttgagaagattcaggatgaaacctggaaattaccggatggtagttattac
tccaaatacgacttcgccggttatatgcgcaaaaccccggtctggggcgtatacggcaac
aatatcggtgcatggatagtcccgggtagtactgagtatatgtcgggtgacgacaccaag
caggatttgatggtgcatcaggacggtctggcgatcatgtatatgacggggtcgcatttt
ggtacgccggacttgattgcccctccaggttggcaaaagctgtatggaccctggttgttg
tatgtgaacgccggtaccgatgagcagatgtacagtgacgcgctggcgcgtagtctgcag
gaaatcgcctcatggccatataattgggtaaacgacagtcgtttttcggtggatcgcgcc
agtgtcaccgggagtgttaataccaccgtcccgttaaacgtgacgctatcgtcttcgctc
aatgaagcgtcagatgtacagaccttagggtatgccttcaccaccaataccgacagtcag
ggaaatttccgctttgataaggtgcgcaaaggaaaatataccctgacgatttacgccaat
ggtggcagcaggccgggcgtgctctacagcgatgtagtgaatgtcaccggcaatacgccg
atacctgctatccagttagctcaagcggcaccggtggtgtgggctattggtcaaagtgat
cggctggcgtctgaattccgatttggcgaccagttgcgtaattatcactggcagaatgat
gttcccgcaaatctgacttataccatcggcgagtcgagtccagcacaggattggtattac
gcccaaacgaatcccggtagctggaatgtgaattatatcgatcgtgccgatggcagcagc
agggtgctgaatgtggcgtttgccgcggccagcaatcgtgggatgaccaacccgacgacg
ccgtcgttatcggtgttggtcaacggcactaaagtcaaagacattcagtatgacaacgac
aaatccgtgtaccgcggggcgcttaacagcggtaaatatcactacgagcgtattcccatc
gacagtggcttactgcgcgacggcaccaacaccattaccttcacgctgaatggcggcacc
tttatgtatgacgctgtgacactgacaaaatag
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