Oleidesulfovibrio alaskensis: Dde_0003
Help
Entry
Dde_0003 CDS
T00294
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dde03032
]
Dde_0003
03400 DNA repair and recombination proteins [BR:
dde03400
]
Dde_0003
Enzymes [BR:
dde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dde_0003
DNA replication proteins [BR:
dde03032
]
Prokaryotic type
DNA Topoisomerases
Dde_0003
DNA repair and recombination proteins [BR:
dde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dde_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
GyrB_hook
ZNHIT3_C
SASA
Motif
Other DBs
NCBI-ProteinID:
ABB36804
UniProt:
Q317S2
LinkDB
All DBs
Position
2797..5190
Genome browser
AA seq
797 aa
AA seq
DB search
MTNETQKQSYDAANITVLEGLSAVRMRPAMYIGSTDSRGLHHLVYEVVDNSIDEAMAGYC
DKVTVKLHLDNSVTVIDNGRGIPVDIHPKEGRPAVEVVMTVLHAGGKFDNDSYKVSGGLH
GVGVSCVNALSEYLEVTVRRDGYKYHHRFERGVPVKELERVGETDLRGTTIRFRPDEEIF
ETNQFSFDILKKRFEELAYLNPGLEVEFIDERTGDTASFHYEGGIREFVKNLNSGEGGVH
SIIFASGESDNVMVDFALQYNAGYKENMLTFANNIRTKEGGTHLAGFKTALTRAINNYIQ
NSDLPKKLKVKLSGDDVREGLTGVVSVKLPNPQFEGQTKTKLGNSEVAGIVSGLVYENLN
TYFGENPKDAKLIIEKAVDAARARDAARKAKDLVRRKGALSDNALPGKLADCQSKDPSES
ELFIVEGDSAGGSAKQGRNPSTQAILPLRGKILNVEKTRFDKMLANKEVKALITAMGAGI
GEEDIDYGKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQYPELIDRGHLYIAQPPLFRVY
NSKFERFIKDETELNTYLLERIAKDVVIEAHNGMEFRETQILDLLKAIRFINARIADVEN
VGIGRNLFLAFLEYGEKLSPQFFEAPEFNGFGTYLQEKGYSVQTSVDESGLERRVYLEFE
DSNGHKTRIGNEFFNSKMYKQPYDSMADMRRICGGFSFVVDRKGERTEVENIFVLLDHVL
QEARKGINIQRYKGLGEMDAEQLWVTTMNPENRVLLQVQVDDAEEANEIFEQLMGDRVEP
RREFIVRNALSVQELDI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgagacacaaaagcagagctacgacgcggcgaacatcaccgttcttgagggg
ttgtccgctgtgcgcatgcgccctgccatgtacataggcagcactgacagccgcggtctg
caccatctggtttacgaagtggtggataactccatcgacgaagccatggcgggatactgc
gataaagtcaccgtgaagctgcatcttgataacagcgtgaccgttattgataacggacgc
ggcattcccgtggacatccacccgaaagaaggccgtcccgcggttgaagtggtcatgacc
gtgctgcatgccggcggcaagttcgacaacgattcgtacaaggtgtcgggcgggctgcac
ggggtgggtgtttcgtgcgtgaacgccctttccgaatatctcgaagttaccgtgcgtcgt
gacgggtataaatatcatcaccgctttgaacgcggtgtaccggtcaaggaactggagcgc
gtcggagaaaccgacctgcgcggcaccaccatccgcttccgtccggacgaagaaattttt
gagaccaatcagttttccttcgatatcctcaaaaaacgctttgaggagctcgcgtacctc
aatcccgggctcgaggtcgagttcatagacgaacgtaccggagataccgcctcgtttcat
tacgaggggggtatccgtgagtttgtgaagaacctgaactccggcgaaggcggggtgcac
tccatcattttcgcttcgggcgaatcggataacgtgatggtggatttcgcgttgcagtac
aacgcggggtataaggaaaacatgctcacctttgccaacaacatccgcaccaaggaaggc
ggcacgcaccttgccggcttcaagaccgcgctcacaagggccatcaacaactacatccag
aactccgacctgcctaaaaagctcaaggtcaaactgtcgggtgatgatgtgcgggaaggt
ctgaccggcgttgtcagtgttaaactgcccaatccgcagtttgaagggcagacaaagacc
aagctgggcaacagcgaggtggcgggtattgtctccggtctggtgtatgaaaatctcaac
acctacttcggcgaaaaccccaaagatgccaagctgatcatagaaaaggccgtggatgcc
gcccgtgcacgtgacgccgcccgcaaggcgaaggatcttgtacggcgcaaaggggcgctt
tccgacaatgccctgcccggcaagctggctgactgccagagcaaggatccctcggaatcc
gaactgttcatcgtggaaggtgactccgcaggcggttctgcaaaacaggggcgcaatcct
tccactcaggccattctgccgttgcgcggtaaaattctgaacgtggaaaagacccgcttt
gacaagatgctggccaacaaggaagtcaaggctctcatcacggccatgggggcgggaata
ggcgaagaagacatcgactacggcaagctgcggtaccacaaaatcgtcatcatgaccgac
gccgacgtggacggtgcccacatacgcacgctgctgctgacgttcttctatcgccagtat
cccgagctgatagacagggggcacctgtatatcgcccagccgccgcttttccgtgtgtac
aacagcaagttcgagcggtttatcaaagatgaaaccgagctgaacacctatctgctggaa
cgcattgccaaagacgtcgtcatcgaggcgcataacggcatggagttccgtgaaacgcag
atactcgacctgctgaaagccatacggttcatcaatgccagaattgccgacgtggaaaac
gtgggaataggccgtaatctctttctcgcgtttcttgaatacggcgaaaaactgtcgccc
cagttttttgaggcgcctgaattcaacggcttcggaacgtatctgcaggaaaaaggctat
tccgtgcagaccagcgttgacgaatccggactggaacgccgtgtgtacctggaatttgaa
gacagcaacgggcacaagacccgcatcggcaacgagttcttcaactccaagatgtacaaa
cagccttacgattcgatggccgacatgcgccgcatctgcggcggattctcgtttgtggtg
gaccgcaagggcgaacggaccgaagtggaaaacatcttcgttctgctggaccatgtgctg
caggaagcgcgcaagggtataaacatccagcggtataaaggtctgggcgaaatggatgcc
gaacagctttgggtgaccaccatgaaccccgaaaaccgcgtgctgctgcaggtacaggtg
gatgacgcggaagaggccaacgagatatttgaacagctcatgggcgacagggttgaaccg
cgccgcgaattcatcgtgcgtaatgccctgagcgttcaggaactggatatttaa
DBGET
integrated database retrieval system