Deferribacter desulfuricans: DEFDS_1003
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Entry
DEFDS_1003 CDS
T01188
Symbol
trpS
Name
(GenBank) tryptophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DEFDS_1003 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddf01007
]
DEFDS_1003 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddf03016
]
DEFDS_1003 (trpS)
Enzymes [BR:
ddf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
DEFDS_1003 (trpS)
Amino acid related enzymes [BR:
ddf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
DEFDS_1003 (trpS)
Transfer RNA biogenesis [BR:
ddf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DEFDS_1003 (trpS)
Prokaryotic type
DEFDS_1003 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1f
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
BAI80473
UniProt:
D3PD00
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All DBs
Position
998045..999025
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AA seq
326 aa
AA seq
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MEKVLSGMRPTGKLHIGHYFGALKNWVKLQEQYECFYFVADWHALTTSYENPEDINTFRK
ELILDWLSVGIDPEKSTLFVQSKNLYHAELFVLLSMITPVAWLERCPSYKEIKMEMKDRD
LNNLGFLSYPLLQTVDIILYSAKYVPVGVDQIPHIEISREIVRRFHYLYDCEIFVEPEGL
LTEVPKLLGTDGRKMSKSYGNTIMLSEDLKSVEKKVMTMITDTNRKRRSDPGNPDVCPVF
DYHKVFSTEDEKQEIIFGCKNAKIGCVDCKKILLKHLFEFLTPIQEKRKEYEKIIGDIDD
FIKDGQERANTIAGEIMEKVRRVMKI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtattaagcggtatgagacctacaggtaaattgcatattggtcattatttt
ggggctttgaaaaattgggtaaaactgcaggagcagtatgaatgtttttattttgttgca
gattggcatgctttaacaactagttatgaaaacccagaagatattaatacttttagaaaa
gaattaatcctggattggttgagtgtggggattgatccggaaaaaagcaccctatttgtt
caatctaaaaatctttatcatgcagaactgtttgtattgctttctatgattactccagtt
gcctggttggagaggtgcccttcttataaagagataaagatggaaatgaaagatagggat
ttaaataatttaggttttttaagttatccattactgcagactgttgatattattctttat
agcgcaaaatacgttcctgtaggggttgatcaaatacctcatatagaaataagtagagag
attgtgagaaggtttcattatctttatgactgtgagatatttgttgaacctgaaggttta
ctgacagaagttcctaagcttttgggtacagatggtagaaaaatgagtaaatcttatggg
aatacgattatgctcagtgaagatttaaaaagtgttgaaaagaaagtaatgactatgatt
acagacactaatagaaaaaggagaagtgaccctggtaatccagatgtatgtccagttttt
gattatcataaggtgttttcaacagaggacgaaaaacaagagataatctttggttgtaaa
aatgcaaagattgggtgtgtggattgtaaaaaaatacttttaaaacatttgtttgagttt
ttaaccccaatacaagaaaagagaaaagaatatgaaaaaatcattggtgatatagatgat
tttattaaagatggtcaagagagagctaatacaatagcaggtgaaataatggaaaaagtt
agaagagtaatgaaaatttga
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