KEGG   Desulfitobacterium dichloroeliminans: Desdi_2684Help
Entry
Desdi_2684        CDS       T02390                                 

Definition
(GenBank) ATP-dependent DNA ligase LigD polymerase module
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ddl  Desulfitobacterium dichloroeliminans
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ddl00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Desdi_2684
Enzymes [BR:ddl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Desdi_2684
DNA repair and recombination proteins [BR:ddl03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Desdi_2684
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2723797..2726244)
Genome map
AA seq 815 aa AA seqDB search
MTGRLSEYNEKRNFTKTLEPEGKIDSDEQLRFVVQHHLARNDHYDLRLEWQGALLSWAVP
KGPSYNTHDKRLAVQVEDHPLEYRNFEGMIPKGEYGGGVVMLWDEGLWEPRGNVDEGLIE
GSLKFVLHGRRLKGKWALVRLKSKDGETRDNWLLLKEKDEHAKNEVGIATFTTSIRTDRS
MSEIAAGAETKITRNPFDRADVQLAKLITKVPVGEDWLYELKYDGYRILAFVEGNSVRLM
TRNDNDYTRRFSGVATALITMAAGRAMILDGEMTITNPEGKTDFQALQNYLKNPQEQSLT
YIVFDLLALDGMDLRGRPLIDRKAALEALLKDAPGSIYYSRHVIGKGKESFLAACEAGLE
GIIGKRMDSLYRSTRNGDWIKLKCEQRRNFVIGGYTLSDKKTSGVSSLLLGIYEGEDFIY
CGRAGTGFSERERKKLAEHFRSLHKAEPSFKEAPQARSNERITWLEPQLVAEIKFAEWTE
DQRLRQASFKGLQADKHPRDIQKETTINELDSPQEAENPKELESKMVTKDNSIVIAGIKI
TNPDKVMFEEPKISKADVVRYYEMVSERMLPHVSYRVLSIVRCPKGISQTCFYKKHPGPD
SKGIITLPITTGSGEIEDYFYIENKLGLISEAQMGTLEFHTWGSRIEVLEKPDLMVFDLD
PDEGMDLSRVRQGVRDVKSILSELSLNAYLKTSGGKGYHVVVPLEPSVSWEVFYSFARGV
AEVMEQKWPDRYTSNVRKAKRAGKIFIDWIRNGRGATSIAPYSLRTRKGAKVSMPIDWDE
LDTIAPDGIDMAEALARMAGADPWQDFFRAQQKLK
NT seq 2448 nt NT seq  +upstreamnt  +downstreamnt
atgacggggcggctaagtgaatacaacgaaaaaagaaattttactaaaacgctggagcct
gaagggaaaatagattctgatgagcagttaagatttgttgtccaacaccatctagcccgc
aatgaccactatgatttgcgcttggaatggcagggggctcttttgagttgggctgtacct
aagggtccttcctataatacacatgacaagaggcttgctgtccaagtggaggatcaccct
cttgaatacaggaactttgaggggatgattcccaagggcgaatatggtggcggcgtggtc
atgctctgggatgagggcttatgggagcctcgtggcaatgtggatgaagggctgattgaa
ggtagcctgaagttcgttctgcacggaagacggcttaagggaaaatgggccttggtccgg
ctgaaatcgaaggacggagagacgagggataactggcttttgttgaaagaaaaagatgaa
catgccaaaaacgaagtagggattgccacatttaccaccagcatccggaccgaccgctcc
atgtcagaaatcgcagccggtgccgagacaaaaatcacaaggaacccctttgacagagcg
gatgtacaactggccaagctgataaccaaggttcctgtgggtgaggattggctttatgag
ttgaagtatgacggctatcggattttggcgtttgtggaaggcaatagcgtccggttgatg
actaggaacgacaatgattatactagacggttttcaggggtggctactgccctcatcact
atggctgccggaagggcaatgattctcgatggggaaatgaccatcacgaatcctgagggc
aagacagatttccaggcgctgcaaaactatctgaagaacccccaggagcaaagcttaacc
tatatcgtctttgatcttctggcgttagatggtatggatctgcgaggacggccccttatc
gacagaaaagctgcccttgaagctttgctaaaggatgcgcccggaagcatttactacagc
cgacatgttatcggcaagggaaaggagagctttcttgctgcctgtgaggcaggtctggag
ggaatcatcggtaaaagaatggattccttatacaggtcaacgagaaacggggactggatc
aaactgaaatgtgagcaaaggcggaattttgtcattgggggatatacgctatccgacaaa
aaaaccagcggagtaagctcgcttctgcttggaatctatgaaggcgaggatttcatctat
tgcggacgcgccggaacggggttcagtgaacgtgaaagaaagaagctggcggaacatttc
agaagcctacacaaggcggagccgtctttcaaagaagcaccccaggcaagatctaatgaa
agaattacttggcttgaacctcaactggtcgcggaaattaaatttgctgaatggacagaa
gatcagcggttgaggcaagcaagctttaaaggcttgcaggcagataagcatcctcgggat
atccaaaaagaaacgaccatcaatgaattagatagtccccaagaagcggagaatccaaaa
gaattggagagcaaaatggtaacaaaggacaacagtatcgtcatcgctggaataaaaatt
accaatccggataaggtgatgtttgaagaacctaaaatttcaaaagcggatgtggtccgc
tattacgaaatggtgtcggaacgtatgctgccccatgtaagttaccgagtccttagtatt
gtacgctgtcccaagggcatctcgcagacttgcttctataaaaagcatcccggtccggac
agcaagggaatcatcactcttccgatcaccaccggcagtggggaaattgaagattatttc
tatattgagaacaaactgggacttatttcagaagcacagatggggacgctagaatttcat
acatggggaagccgtatcgaggtactggaaaaacctgatctgatggtattcgatctagat
ccggatgaaggaatggatctaagcagggtgcgtcagggggtgcgggatgttaaaagtatt
cttagtgagctttccctgaacgcctatcttaagaccagcggcggcaaaggttatcatgtg
gttgttcctttagaaccctccgtttcctgggaagtgttttatagctttgctcggggtgtt
gccgaggtgatggagcaaaaatggcctgaccgatatacaagcaatgttagaaaggcaaag
cgagcaggcaaaatatttatcgactggattcgcaacggcagaggggctaccagcattgcc
ccctattccttaagaacaagaaaaggagctaaggtatcgatgcctatcgactgggatgaa
cttgacacgattgccccagacggtatcgatatggcggaggcgctcgcgaggatggccggc
gctgacccttggcaagatttctttcgagctcagcagaagctaaaatga

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