Dickeya dianthicola: DDI_1605
Help
Entry
DDI_1605 CDS
T05141
Name
(GenBank) ATP-dependent RNA helicase YejH
KO
K19789
DNA repair protein RadD
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_1605
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
DDI_1605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
AAA_30
SWI2_SNF2
zf-tcix
zinc_ribbon_2
zf-ribbon_3
SLFN-g3_helicase
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATO32773
LinkDB
All DBs
Position
complement(1615397..1617202)
Genome browser
AA seq
601 aa
AA seq
DB search
MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRE
LVEQNHAKYCALGLQADIFAAGLNQHDSEGKVVFGSVQSVARHPDKFDDAFSLLIVDECH
RISDDENSQYQQIIQQAQQANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDSCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSDGLFNNGLFNNGLFNNGRFSDV
ELNRELKRQQRVTPHIVRQITEYAANRRGVMIFAATVEHAREVAGLLPAGEAALISGETP
APQRDALIAAFKQQQLRYLVNVSVLTTGFDAPHIDVIAILRPTESVSLYQQIIGRGLRLF
PGKSDCLILDYAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGSVIE
HYGRRCQGWQADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQSCEAVLVDPDDMLKAA
LKLKDALVLRCSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRSAFTHVFLR
AHQRAPGVPFHWQRADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHELR
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacactgcgcccgtaccagcaagaagcggttgacgccacccttgcctatttt
cgccagcacaccgccccggcggtgatcgtgttacccaccggcgccggtaaaagcctggtg
atcgccgaactggcgcggctggcgcgcggccgggtattggtgctggcgcacgtcagggag
ctggtggagcagaatcacgccaaatattgcgcgctgggcttgcaggcggatattttcgcc
gccgggctcaaccagcacgacagcgaaggcaaggtggtgtttggcagcgtgcagtcggtg
gcgcggcaccctgacaaatttgatgacgccttctcgctgctgatcgtcgatgaatgccac
cggattagcgacgatgaaaacagccagtaccagcaaatcatccagcaggcgcagcaagcc
aacccccagttgcggctgctgggattgaccgccaccccttatcgcctcggccggggctgg
atctaccagtaccactatcacggtatgatccgcggcgacgacagttgcctgttccgtgac
tgcatttacgaactgccgctgcgctacatgatccgacatggctttctggtgccgcccgag
cggctggacatgccggtagtgcagtacgacttcagccaactggcagcgcgcagcgacgga
ctgttcaataatggactgtttaataatggactgttcaataacggacggttcagcgatgtg
gaactgaaccgggaactgaagcgtcagcagcgggttacgccgcacatcgtccgccagata
acggaatacgccgctaaccggcggggcgtgatgattttcgccgccacggtggagcacgcg
cgggaagtcgcagggctgctgccggccggcgaagcggcgttgatcagcggcgaaacgcct
gcaccgcagcgggatgcgctgatcgccgccttcaagcagcaacagttgcgctatctggtt
aacgtgtcggtgctgacgaccggctttgatgcgccgcacatcgatgtgatagccatactg
cgcccgacggaatccgtcagcctctaccagcaaatcattggccgcggcctgcgcctgttt
cccggcaaaagcgactgcctgattctggactacgccggcaaccctttcgatctctacacc
cccgaagtcggccacagcaaaccgcacagcgacagccagccggtgcaggtgttctgcccg
cagtgcggcttcgccaacctgttctggggaaaatgcaccgacgatggcagcgtcatcgag
cattacggccgccgttgccagggatggcaggcggacgaacaagggcggcggcaacaatgc
gactatcgctttcgtttcaaaagctgcccgcattgcggcgcggaaaacgacatcgccgcc
cgacgctgtcagtcatgcgaagcggtgctggtcgatccggacgatatgctgaaagcggcg
ctgaaactgaaagacgcgctggtactgcgctgcagcggcatgaacctgcagcatggcgcc
gacgccaaaggcgaatggctgcgcatcacctactacgatgaagacggcgccgacgtcagc
gaacgtttccggctgcacaccgccgcccagcgcagcgcctttacgcatgtttttttgcgc
gcgcaccagcgcgcacccggcgttcccttccactggcagcgtgctgacgatgtggtggcg
cagcaggcgctgctgcgcgcgccggatttcgtggtggcccgtttgcagggcaaattctgg
caggtgcgggaaaagatcttcgattatcagggccgctatcgccgcgcccatgaactgcgc
ggctag
DBGET
integrated database retrieval system