KEGG   Dickeya dianthicola: DDI_1605
Entry
DDI_1605          CDS       T05141                                 
Name
(GenBank) ATP-dependent RNA helicase YejH
  KO
K19789  DNA repair protein RadD
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ddq03400]
    DDI_1605
DNA repair and recombination proteins [BR:ddq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     DDI_1605
SSDB
Motif
Pfam: ResIII DEAD Helicase_C AAA_30 SWI2_SNF2 zf-tcix zinc_ribbon_2 zf-ribbon_3 SLFN-g3_helicase AAA_22 AAA_16
Other DBs
NCBI-ProteinID: ATO32773
LinkDB
Position
complement(1615397..1617202)
AA seq 601 aa
MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRE
LVEQNHAKYCALGLQADIFAAGLNQHDSEGKVVFGSVQSVARHPDKFDDAFSLLIVDECH
RISDDENSQYQQIIQQAQQANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDSCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSDGLFNNGLFNNGLFNNGRFSDV
ELNRELKRQQRVTPHIVRQITEYAANRRGVMIFAATVEHAREVAGLLPAGEAALISGETP
APQRDALIAAFKQQQLRYLVNVSVLTTGFDAPHIDVIAILRPTESVSLYQQIIGRGLRLF
PGKSDCLILDYAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGSVIE
HYGRRCQGWQADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQSCEAVLVDPDDMLKAA
LKLKDALVLRCSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRSAFTHVFLR
AHQRAPGVPFHWQRADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHELR
G
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtcatttacactgcgcccgtaccagcaagaagcggttgacgccacccttgcctatttt
cgccagcacaccgccccggcggtgatcgtgttacccaccggcgccggtaaaagcctggtg
atcgccgaactggcgcggctggcgcgcggccgggtattggtgctggcgcacgtcagggag
ctggtggagcagaatcacgccaaatattgcgcgctgggcttgcaggcggatattttcgcc
gccgggctcaaccagcacgacagcgaaggcaaggtggtgtttggcagcgtgcagtcggtg
gcgcggcaccctgacaaatttgatgacgccttctcgctgctgatcgtcgatgaatgccac
cggattagcgacgatgaaaacagccagtaccagcaaatcatccagcaggcgcagcaagcc
aacccccagttgcggctgctgggattgaccgccaccccttatcgcctcggccggggctgg
atctaccagtaccactatcacggtatgatccgcggcgacgacagttgcctgttccgtgac
tgcatttacgaactgccgctgcgctacatgatccgacatggctttctggtgccgcccgag
cggctggacatgccggtagtgcagtacgacttcagccaactggcagcgcgcagcgacgga
ctgttcaataatggactgtttaataatggactgttcaataacggacggttcagcgatgtg
gaactgaaccgggaactgaagcgtcagcagcgggttacgccgcacatcgtccgccagata
acggaatacgccgctaaccggcggggcgtgatgattttcgccgccacggtggagcacgcg
cgggaagtcgcagggctgctgccggccggcgaagcggcgttgatcagcggcgaaacgcct
gcaccgcagcgggatgcgctgatcgccgccttcaagcagcaacagttgcgctatctggtt
aacgtgtcggtgctgacgaccggctttgatgcgccgcacatcgatgtgatagccatactg
cgcccgacggaatccgtcagcctctaccagcaaatcattggccgcggcctgcgcctgttt
cccggcaaaagcgactgcctgattctggactacgccggcaaccctttcgatctctacacc
cccgaagtcggccacagcaaaccgcacagcgacagccagccggtgcaggtgttctgcccg
cagtgcggcttcgccaacctgttctggggaaaatgcaccgacgatggcagcgtcatcgag
cattacggccgccgttgccagggatggcaggcggacgaacaagggcggcggcaacaatgc
gactatcgctttcgtttcaaaagctgcccgcattgcggcgcggaaaacgacatcgccgcc
cgacgctgtcagtcatgcgaagcggtgctggtcgatccggacgatatgctgaaagcggcg
ctgaaactgaaagacgcgctggtactgcgctgcagcggcatgaacctgcagcatggcgcc
gacgccaaaggcgaatggctgcgcatcacctactacgatgaagacggcgccgacgtcagc
gaacgtttccggctgcacaccgccgcccagcgcagcgcctttacgcatgtttttttgcgc
gcgcaccagcgcgcacccggcgttcccttccactggcagcgtgctgacgatgtggtggcg
cagcaggcgctgctgcgcgcgccggatttcgtggtggcccgtttgcagggcaaattctgg
caggtgcgggaaaagatcttcgattatcagggccgctatcgccgcgcccatgaactgcgc
ggctag

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