Desulfovibrio desulfuricans ATCC 27774: Ddes_1001
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Entry
Ddes_1001 CDS
T00837
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dds03009
]
Ddes_1001
Ribosome biogenesis [BR:
dds03009
]
Prokaryotic type
ribosomal protein modification factors
Ddes_1001
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Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_1
TPR_12
TPR_16
TPR_14
TPR_8
TPR_11
TPR_19
PknG_TPR
TPR_MalT
Motif
Other DBs
NCBI-ProteinID:
ACL48908
UniProt:
B8IZI1
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Position
complement(1170018..1171760)
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AA seq
580 aa
AA seq
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MNTHLPRIQLAPCPKGYTRDLDKTMSPPQTIARVRQRLTVADLDILASTRRVDVDRLGIP
VFLSICGADARRIMPTRKQMGKGSSPEQAEASALMELMERYAFFSFWQKRPHMERATWSE
AEERFGSALIPLAEMLRSVNEELDENKARRVLNLISWSFYPATRLPDETTAWLPLDWFKL
LGEFNGTSAGNSPEESLLQGLSELIERHVCCLVDRDRSGTPTIDPTTCQDPVLRQLTEAF
AKEGVHLVLKDFSLGMPLPTVAAIAWDPATLGKSSEIVFTAGTAASPAKAAIRAVTEVAQ
LAGDFCTNACYEASGLPKFNTLEEAAWLLDGPTVSLESLPTVENSDIRQELLAALEGIRP
LTMYAVETTHPHLGIPAHYNIIPGMAFRERDRNQSLGLFVGRKLVEEADAPTALEGLRVL
EQCYPGAHFLPFFHGMLALRAEDWDSARAFFDQALPLQPDTDAQALAAFYLGYTDTLQGH
WAESIPALAEAVKLCPDMKEYGNLLGVARFKTGDYAAAAEAFAAVLRVDKGSAMDLANLG
LCEKFMGKNEDARRHLTAALELDPNLDFARQHLAQMDAQG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcatcttccccgcatacagctggccccctgtcccaagggctacacccgtgat
ctggacaaaaccatgagcccgccgcaaaccatcgcccgtgtgcgccagcggctgacagtg
gccgacctggacatccttgccagcaccagaagggtggacgtggaccggttgggcattccc
gtttttctcagcatatgcggggctgatgcccgacgcatcatgcccacgcgcaagcagatg
ggcaaaggctcgtctcctgagcaggccgaagcatctgcccttatggagcttatggagcgc
tacgcatttttcagcttttggcagaagcggccccatatggaacgggccacgtggagcgaa
gccgaagagcgcttcggcagcgccctgattccgcttgccgaaatgctgcgctcagtcaat
gaagaacttgatgaaaacaaggcccgccgtgtacttaaccttataagctggagcttttac
ccggcaacgcgcctgcccgatgaaaccacggcatggctgccgctggactggttcaagctg
ctgggcgaattcaacggcacttctgcgggtaacagccctgaagaatctcttcttcagggg
ttgagcgaacttattgagcgccacgtatgctgccttgttgaccgtgatcgttcgggcacc
cccaccattgatcccaccacctgccaggatccggtgcttcgccagttgactgaagccttt
gccaaagaaggcgtccatctggtgctcaaggatttttccctcggcatgcccctgcccaca
gtggctgccatcgcgtgggatccggccaccctcgggaaaagttctgaaatcgtgtttact
gcgggtacggcagcgtcgccagccaaggcggccatccgcgcggtaaccgaagttgcccag
ctggctggagatttttgcaccaatgcctgttacgaggcatccggcctgcccaagttcaac
acccttgaagaggccgcatggctgcttgacggccccaccgtgagcctggaaagcctgccc
acagtagaaaacagcgatatcaggcaggagctgctcgccgcccttgaaggcattcgcccg
ctgaccatgtacgcggtggaaaccacccatccacacctgggcattccggcccattacaat
atcatacccggcatggctttcagagagcgtgaccgcaaccagagcctggggctttttgtc
ggccgcaagctggtggaagaagctgacgcccctaccgccctcgagggcctgcgtgtgctt
gagcaatgctaccccggtgcgcattttctccccttttttcacggcatgctggccttgcgg
gcagaagactgggacagcgcccgcgcctttttcgaccaggccctgcccctgcagccggat
accgatgcccaggctctggcagccttttacctgggatataccgacacccttcaggggcat
tgggccgaatccataccggccctggccgaagctgtgaaactgtgccctgacatgaaggaa
tacggcaatctgcttggcgtggcgcgctttaaaaccggcgattacgcggcagcggcagag
gcctttgccgcagtcctgcgcgtagacaagggttcggccatggacctcgccaatctgggc
ctgtgcgaaaagtttatgggcaagaatgaggatgcccgccgccatctgacggcggctctg
gagctggaccccaacctggattttgcccgtcagcatctggcgcagatggacgcacagggg
taa
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