Pseudodesulfovibrio indicus: AWY79_11120
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Entry
AWY79_11120 CDS
T04404
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
dej
Pseudodesulfovibrio indicus
Pathway
dej03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWY79_11120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dej03021
]
AWY79_11120
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_11120
Enzymes [BR:
dej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWY79_11120
Transcription machinery [BR:
dej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWY79_11120
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWY79_11120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1672
Motif
Other DBs
NCBI-ProteinID:
AMK11627
UniProt:
A0A126QPF1
LinkDB
All DBs
Position
2482242..2482469
Genome browser
AA seq
75 aa
AA seq
DB search
MARITVEDCLEKVSNRFLITQMGIKRVKQYREGYEPLIDTKNKEVVNALREIAAGKVVPD
TSIDLDIENSTNEDA
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggcacggatcaccgttgaagattgtctggagaaagtgagcaaccgcttcctgatcacc
cagatgggcatcaagcgcgtcaagcagtaccgcgaagggtacgagccgctgatcgacacc
aagaacaaggaagtggtcaacgccctgcgcgagatcgcggcgggcaaggtcgtcccggat
acctccattgacctcgatatcgagaattccaccaacgaggatgcctaa
DBGET
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