Desulfoluna limicola: DSLASN_01080
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Entry
DSLASN_01080 CDS
T07859
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dek
Desulfoluna limicola
Pathway
dek02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSLASN_01080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dek02000
]
DSLASN_01080
Transporters [BR:
dek02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSLASN_01080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
ATP-synt_ab
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
BCS94476
LinkDB
All DBs
Position
134540..135538
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AA seq
332 aa
AA seq
DB search
MATEHLQKEEPILSVQGLSVAFDTEAGPVRAVDTVGFDLIKGRTLGIVGESGCGKSVTAL
SIMRLLPQPMARIEEGRVVLDGTDLVALPPESMQSIRGASVSIIFQEPMAALNPVHTLYK
QVSEPLRVHKPELNKKSLEAEVVRLLSDVGIPDADGRLSAYPHQLSGGMRQRVMIAMALA
LSPDILIADEPTTALDVTVQAQILDLIRRIQKSIGMSVIFITHDLGVIAEQCDDVVVMYA
GKVVERAGVSELFEDPKHPYTKGLLDSMPRLDAPRKTRLSTISGQVPGLMDLPPGCRFQN
RCPHVMERCHTEVPKDLMVRTNHLVACHLYDV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggaacatctgcagaaggaagagcccattctctcggttcaggggctcagcgtg
gcttttgatacagaagcgggtcccgtgcgcgccgtggatacggtggggttcgacctgatc
aaagggcgaaccttggggattgttggggagtcgggctgtggcaagagcgtcacggctttg
tccatcatgcgccttctgccccaacccatggcccgcatcgaagaggggagggtggtgctt
gacggaaccgaccttgtcgcgcttcccccagagtccatgcagtccatccggggcgcctcg
gtctccattatctttcaggagcccatggccgccctgaacccggtccacaccctttacaaa
caggtctcggaaccccttcgggtccacaagccggaactgaataaaaagtcactcgaggca
gaggtcgttcgccttctctccgacgtgggcattcccgatgccgacgggcgcctttccgcc
tatcctcaccagctctcaggcggcatgaggcaacgggtgatgatcgccatggccctggcc
ctctcgccggatatcctcattgcggacgagcccaccacggccctggatgtgacggtgcag
gcccagatcctcgatttgatccgacgcatccagaaaagcatcggcatgtccgtgatcttc
attacccacgacctgggcgtcatcgcggagcagtgcgatgacgtggtggtgatgtacgca
ggcaaagtggtggaacgggcaggggtgtccgaactttttgaagacccgaaacacccctac
accaaagggctgcttgactccatgccccgcctggacgccccgcgcaagacacgtttgtcc
accatttccggtcaggtgccgggcctcatggatctgccccccgggtgccggtttcagaac
cggtgcccccatgtgatggagcggtgccacaccgaggtgccgaaggatctcatggtacgc
accaatcatctggttgcctgtcatctctatgatgtgtag
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