Delftia sp. Cs1-4: DelCs14_1287
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Entry
DelCs14_1287 CDS
T01497
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03030
DNA replication
del03410
Base excision repair
del03420
Nucleotide excision repair
del03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DelCs14_1287
03410 Base excision repair
DelCs14_1287
03420 Nucleotide excision repair
DelCs14_1287
03440 Homologous recombination
DelCs14_1287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
del03032
]
DelCs14_1287
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_1287
Enzymes [BR:
del01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DelCs14_1287
DNA replication proteins [BR:
del03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DelCs14_1287
DNA repair and recombination proteins [BR:
del03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DelCs14_1287
NER (nucleotide excision repair)
GGR (global genome repair) factors
DelCs14_1287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AEF88319
LinkDB
All DBs
Position
1458821..1461664
Genome browser
AA seq
947 aa
AA seq
DB search
MSNSKTLVLIDGSSYLYRAYHAMPDLRAEPGNPESPATGAIRGMINMLQAIRKEVAADYA
VCVFDTSGPTFRDTLYPEYKAHRSPMPDDLRSQIEPIHEVVRLLGWPVLAIQGVEADDVI
GTLAKTAAAQGVNVVISSGDKDLSQLVDSHIMVMDTMSGKRRDVAGVTAEFGVPPTQMID
YQALVGDAVDNVPGVSKVGPKTAVKWLAEHGSLDGLIAAADGIKGVAGQNLRDAIASGQL
ALSRQLVTMKTDCDLTAEVPTLPVLDALAPREPDTAPLRDFYERYGFKGLARMLGGAAPE
PDALEAVKAGRKPAAKPRADQSTGDMFAQEQAESDDATTEAEAVQQRPLDYDVVLTWEAF
DQWLAKINAAELTALDTETTSLDEMRAEIVGISLSVEPGAAAYIPLRHAGPDAPEQLPAD
EVLQRLKPWLEDAARPKLGQHVKYDRHVFANAGIEVQGYVHDTMLQSYVLEVHRPHGLAS
LALRHTNRTGISYEDLCGKGAHQIPFAQVPVDKAAAYACEDADQTLDVHRVLWPQLQAND
GLRGVYELEIATSEALFRIERNGVLIDAATLAKQSNDLGQRIVQLEQEAYDIAGQPFNLA
SPKQLGEIFFDKLGMPVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYT
DKLAQLALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFIAAPGHVI
ASADYSQIELRIMAHLSGDESLLRAFHEGRDVHRATASEVFNVELEQVSSEQRRYAKVIN
FGLIYGMSSFGLAKNLGIETKAAAAYIDRYFQRYPGVKRYMDETVEFARDHGYVETVFGR
RLYLVDINGGSGPRKKAAERQAINAPMQGTAADLIKKAMVAVQAELDARQSEVRVIMQVH
DELVFELPEGESDWVRTEIPRLMAGVADLKVPLLAEVGLGPNWDKAH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattccaagaccctggtgctgatcgacggctccagctacctctaccgcgcctac
cacgccatgccggacctgcgcgccgagcccggcaacccggaaagccctgccacgggcgcc
atccgcggcatgatcaacatgctccaggcgatcaggaaggaagtggcggccgactacgcc
gtctgcgtgttcgataccagcggacccaccttccgcgacacgctctaccccgaatacaag
gcgcaccgctcgcccatgcccgacgatctgcgctcgcagatcgagcccatccatgaagtg
gtccgcctgctgggctggcccgtgctggccatccagggcgtggaggccgacgacgtgatc
ggcaccctggccaagacggccgccgcccagggcgtgaacgtggtgatctccagcggcgac
aaggacctgtcccagctggtggactcccacatcatggtgatggacaccatgagcggcaag
cgccgcgacgtggccggcgtgacggccgagttcggcgtgccgcccacgcagatgatcgac
taccaggccctggtcggcgatgccgtggacaatgtgcccggcgtgtccaaggtgggcccc
aagacggccgtcaagtggctggccgagcacggctcgctcgacggcctgattgctgcggcc
gacggcatcaagggcgtggccggccagaacctgcgcgatgccatcgcctcgggccagctg
gcgctgagccgccagttggtcaccatgaagaccgactgcgacctgaccgccgaagtgccc
accctgccggtgctcgacgcgctggcgccgcgcgagcccgataccgcgccgctgcgcgac
ttctatgagcgctacggcttcaagggcctggcgcgcatgctcggcggtgccgcgcccgag
cccgatgcgctggaagccgtcaaggccggccgcaagccagcggccaagccgcgtgccgac
cagtccacgggcgacatgtttgcccaggagcaggccgaatccgacgacgccaccaccgag
gccgaggccgtccagcagcgtccgctggactatgacgtggtgctgacctgggaagcgttc
gaccagtggctggccaagatcaacgccgccgaactcacggccctggataccgaaaccacc
tcgctggacgagatgcgtgccgagatcgtgggcatctcgctgagcgtggagcccggcgcc
gctgcctacatccccctgcgccatgccggccccgacgcgccagagcaactgccggccgac
gaggtgctgcagcgcctcaagccctggctggaggatgcggcccggcccaagctgggccag
cacgtcaagtacgaccgccatgtcttcgccaatgccggcatcgaggtgcagggctatgtg
cacgacaccatgctgcaaagctatgtgctggaagtgcaccgcccgcacggcctggccagc
ctggcgctgcgccacaccaaccgcacgggcatcagctatgaagacctgtgcggcaagggc
gcccaccagatcccgttcgcccaggtgcccgtggacaaggctgccgcctatgcctgcgag
gatgccgaccagaccctggatgtgcaccgcgtgctgtggccgcagctgcaggccaacgac
ggcctgcgcggcgtctacgagctggagatcgccaccagcgaggccctgttccgcatagag
cgcaacggcgtgctcatcgatgccgccacgttggccaagcagagcaacgacctgggccag
cgcatcgtgcagctggagcaggaggcctatgacatcgcgggccagcccttcaacctggcc
agccccaagcagctgggcgaaatcttcttcgacaagctgggcatgcccgtggtcaagaag
acggccaccggcgcacgcagcaccgacgaagaggtgctggagaagctggccgaggactat
ccgctgcccgccaagctgctggagcaccgcagcctgtccaagctcaagggcacctatacc
gacaagctggcccagctggcgctgccgcgcacgggccgcgtgcacacgcactacgcccag
gccgtggccgtgacggggcgcctgtccagcaacgaccccaacctgcagaacatccccatc
cgcacgcccgaaggccggcgcgtgcgcgaggccttcattgccgcgcccggccatgtgatc
gccagcgccgactactcgcagatcgagctgcgcatcatggcccacctgtcgggcgacgag
tccctgctgcgcgccttccacgaaggccgcgacgtgcaccgtgccacggcatcggaagtc
ttcaacgtggagctggagcaggtcagcagcgagcagcgccgctatgccaaggtcatcaac
ttcgggctgatctacggcatgagcagctttggcctggccaagaacctgggcatagagacc
aaggccgcggccgcctacatcgaccgctatttccagcgctatccgggcgtcaagcgctac
atggacgagacggtggaattcgcgcgcgaccacggctacgtggaaaccgtcttcggccgc
cgcctgtacctggtggacatcaacggcggcagcggcccgcgcaagaaggcggccgaacgg
caggccatcaacgcgcccatgcagggcacggcggccgacctgatcaagaaggccatggtg
gcggtgcaggccgagctcgatgccaggcagtccgaggtccgcgtcatcatgcaggtgcac
gacgaactggtgttcgagctgcccgaaggcgagtcggactgggtgcgcaccgagatcccg
cgcctgatggccggcgtggccgacctgaaggtgccgctgctcgccgaggtgggcctggga
cccaactgggacaaggcacattga
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