KEGG   Devosia sp. H5989: XM25_20420
Entry
XM25_20420        CDS       T04003                                 
Symbol
putA
Name
(GenBank) Proline dehydrogenase-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
deq  Devosia sp. H5989
Pathway
deq00250  Alanine, aspartate and glutamate metabolism
deq00330  Arginine and proline metabolism
deq01100  Metabolic pathways
deq01110  Biosynthesis of secondary metabolites
Module
deq_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:deq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    XM25_20420 (putA)
   00330 Arginine and proline metabolism
    XM25_20420 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:deq03000]
    XM25_20420 (putA)
Enzymes [BR:deq01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     XM25_20420 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     XM25_20420 (putA)
Transcription factors [BR:deq03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    XM25_20420 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH DUF5073
Other DBs
NCBI-ProteinID: AKR58111
LinkDB
Position
complement(4142437..4146030)
AA seq 1197 aa
MSARPFATYDPAPTERSALRQKISAAYTRPETEALPDLIAQASLPPETVAWARNTARKLV
TAIRGKKNGGGVEALIQEYALSSEEGVALMCLAEALLRIPDNETRNALIRDKISTGNWRS
HVGNDRSLFVNAASWGLVVTGKLTTPVVETGLGNALTRLIARGGEPIIRTSVDVAMRMMG
EQFVTGQTIKEALEKARKMEAKGFQYSYDMLGEAAATAADADRYYRDYETAINAIGKANA
GRGPYGGPGISIKLSALHPRYERTKYERVMEELLPRLVKLAVLAKSYNIGLNIDAEEARR
LEISLDLMEALSFNSELEGWNGLGFVVQAYGKRCPFVIDYLIDLARRSKRRLMVRLVKGA
YWDSEIKQAQVDGLADYPVYTRKVYTDVSYLACAKKLLGAPDAIFPQFATHNAQTLATIY
QMAGPEFEVGRYEFQCLHGMGEPLYEEVVGKDKLDRPCRIYAPVGSHETLLAYLVRRLLE
NGANSSFVNQIADPDYPIEELIGDPVAKAASIFPVGSMHPRLAAPRDILGARRNSAGLNL
SNEHDLKTIKTAFARIKPVNGNGLPVRNPADHEDVVGYVTYAEKGEVEAAFAAAAKGGPA
WAALGAAKRGEILRRAGDIMEERLPDLLGLIIREAGKSTQNAIAEVREAIDFLRYYADEA
RDDAAPLGTVVCISPWNFPLAIFTGQVSAALAAGNAVVCKPAEETPLIATEGVRILHEAG
VPADVLRLVIGDGPVGAALVGHKDTHGVVFTGSVEVAQLIQKQLADKLLPDGRPVPLIAE
TGGQNAMIVDSSALTEQVVADVLTSAFDSAGQRCSALRILCVQEDVADHTLTMVKGGLDE
LALANPQFLATDIGPVITAEARDRINGHIEAMKAKGHKVTQLDLPAEAGKGTFVAPTIIE
LNSVSELAGEVFGPVLHVVRFKRSAMDKLIGEINALGYGLTFGLHTRIDETIREVTERIE
VGNVYINRNIIGAVVGVQPFGGHGLSGTGPKAGGPLYMRRMVLDAPVLKGGKPSKEIEAY
RHWLVAENRGDAAAIVAGFAETRLNGAPEVLAGPVGEDNTYLTKPRGTIGLVPATPEGLL
IQLGAVLATGNSARVVAGSETAKVLDTLPSTLAGFVTQGEDLAGVAGVLVEGDAEKAARI
AQEAARLEGPIVLVQGASTKGLIEGTQAYNLDLLVLEVSTSVNTAAAGGNASLMTIG
NT seq 3594 nt   +upstreamnt  +downstreamnt
atgtccgctcgcccgtttgcgacctacgaccctgcacccacggaacgctccgcgctccgc
cagaagatttccgccgcctatacccggcccgaaaccgaagcgctgcccgatctcatcgcc
caggcgagcctgccgcccgaaacggtagcctgggcccgcaacaccgcccgcaagctcgtg
accgccatccgcggcaagaagaatggcgggggcgtggaagcgctgatccaagaatatgcg
ctttcctcggaagagggcgtggcgctgatgtgcctggccgaagccctgctgcgcattccc
gacaacgagacgcgcaacgcgctcatccgcgacaagatctcgaccggcaactggcgcagc
catgtgggcaacgaccgctcgctcttcgtcaatgcggcgagctggggcctggtggtgacg
ggcaagctcaccacgcccgtggtcgagacggggctgggcaatgcgctgacgcgccttatc
gcgcgcgggggcgaacccatcatccgcaccagcgtcgatgtggccatgcgcatgatgggc
gagcagttcgtcaccggccagaccatcaaggaagcgctcgagaaggcgcgcaagatggag
gccaagggcttccagtattcctatgacatgctgggcgaagcggccgcgaccgccgcggac
gccgaccgctactaccgggactacgaaacagccatcaacgccatcggcaaggccaatgcg
ggccggggcccctatggcggcccgggcatctcgatcaagctctcggcgctccatccgcgc
tacgagcgcaccaagtacgagcgggtgatggaggaactcctgccgcgcctcgtcaagctg
gcggtgctggccaaatcctacaatatcgggctgaacatcgacgccgaggaagcgcggcgg
ctcgagatctcgctcgacctgatggaagcgctcagcttcaactccgagctcgagggctgg
aacgggctgggcttcgtggtccaggcctatggcaagcgctgcccgttcgtcatcgattac
ctcatcgacctcgcccgacgctcgaagcgccggctcatggtgcgcctcgtcaagggcgcc
tattgggacagcgagatcaagcaggcccaggtcgacgggctggccgactatccggtctat
acgcgcaaggtctataccgacgtctcctacctcgcctgcgccaagaagctgctcggggcg
ccggacgccatcttcccgcagttcgcgacgcataacgcccagacgctggcgaccatctac
cagatggcgggtccagaattcgaagtggggcgctacgagttccagtgcctgcacggcatg
ggcgagccgctctatgaagaggtggtgggcaaggacaagctcgaccggccctgccgaatc
tatgcgccggtcggaagccacgagacactgctggcctatctggtgcggcgcctgctcgag
aacggggccaattcctcgttcgtcaaccagatcgcggaccccgactatccgatcgaggaa
ctgatcggggacccggtggccaaggcggcgtcgattttcccggtgggctcgatgcatccg
cgcctcgccgcgccgcgcgacatcctgggcgcgcgccggaattcggccggtctcaatctt
tccaacgagcacgatctcaagaccatcaagacggcgttcgcgcgcatcaagccggtcaac
gggaacggactgccggtgcgcaacccggccgaccacgaggacgtggtgggctacgtgacc
tatgccgaaaagggcgaggtggaagccgccttcgccgcggcggcaaagggcggccccgcc
tgggcggccctgggcgctgccaagcgcggggaaatcctgcgccgggccggcgacatcatg
gaagaacggctgcccgatcttctggggctcatcatccgggaagcgggcaaatccacccag
aacgccatcgccgaggtgcgcgaggccatcgacttcctgcgctactatgccgacgaggcc
cgggacgacgcggccccgctgggcacggtggtgtgcatcagcccctggaacttcccgctg
gcgatcttcaccggccaggtgagcgcggcgctggcggcgggcaatgccgtggtttgcaag
ccggccgaggaaaccccgctcatcgccaccgagggcgtgcgcattctccatgaggcgggc
gtgccggcggacgtgctcaggctcgtcatcggcgacggcccggtaggcgccgcgctggtg
ggccacaaggacacccatggcgtggtcttcaccggatcggtggaagtggcccagctcatc
cagaagcagctggccgacaagctgctgcccgacgggcgcccggtgccgctgatcgccgag
acgggcggacagaacgccatgatcgtcgattcctcggccctgaccgagcaggtggtggcg
gacgtgctgacctcggccttcgacagcgccggtcagcgctgctcggcgctgcggatcctg
tgtgtgcaggaagacgtggccgaccacacgctgaccatggtcaagggcgggctggacgag
ctggcgctggccaatccgcagttcctggccaccgatatcggcccggtgatcaccgccgag
gcgcgtgaccgcatcaacggccatatcgaggcgatgaaggccaaggggcacaaggtgacc
cagctcgacctgcccgccgaagccggcaagggcacgttcgtggccccgaccatcatcgag
ctcaactcggtttccgagctggccggggaggtgttcgggccggtgctgcacgtggtgcgc
ttcaagcgctcggccatggacaagctgatcggcgagatcaacgcgctgggctacggcctc
accttcgggctccatacccggatcgacgagaccatccgcgaggtcaccgaacggatcgaa
gtgggcaatgtctatataaaccgcaacatcatcggagcggtggtgggcgtgcagcccttc
ggcgggcacgggctttcgggcaccggccccaaggccggcggcccgctctacatgcgccgc
atggtgctggacgcccccgtgctcaaaggcggcaagcccagcaaggagatcgaggcctac
cggcactggctggtggctgagaaccgcggggatgcggcggcgatcgtcgccggcttcgcc
gaaacccggctcaacggcgcccccgaggtgctggccggcccggtgggcgaggacaacacc
tatctcaccaaaccgcgcggcacgatcggcctggttccggcgacgcccgagggcctgctg
atccagctcggcgcggtgctggcgacgggcaattcggcccgcgtggtggccggcagcgag
accgccaaggtgctcgataccctgcccagtacgctggctggcttcgtgacgcagggcgag
gaccttgcgggcgtggcgggcgtactggtggaaggcgatgccgaaaaggcggcccggatc
gcccaggaagcggcgcgcctggaaggcccgatcgtcctggtgcagggcgccagcaccaag
ggcctcatcgaaggcacgcaggcctataacctcgacctgctggtgctggaagtctcgacc
agcgtcaacacggcggcggcgggcggcaacgcctcgctcatgaccatcggctaa

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