Drosophila erecta: 6542764
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Entry
6542764 CDS
T01060
Name
(RefSeq) uncharacterized protein LOC6542764 isoform X5
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
der
Drosophila erecta
Pathway
der03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6542764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
der03000
]
6542764
03019 Messenger RNA biogenesis [BR:
der03019
]
6542764
04121 Ubiquitin system [BR:
der04121
]
6542764
Enzymes [BR:
der01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
6542764
Transcription factors [BR:
der03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
6542764
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6542764
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6542764
Ubiquitin system [BR:
der04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
6542764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
Nup35_RRM
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
6542764
NCBI-ProteinID:
XP_001969474
FlyBase:
FBgn0102434
UniProt:
B3N9N8
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MNGLSSNDDAVECPLCMEPLEVDDLTFFPCTCGYQICRFCWHRIRTDENKLCPACRKEYP
ENPADFKPLSQEEMIAFKSQKRQRDQQRKQKITENRKHLANVRVVQKNLVFVVGLPPRLA
DADILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYVNNSDALRAIQSVNNIMI
DGRLIKTSLGTTKYCSHFMKNQQCPKGDCMYLHELGDPEASFTKEEMHQGKHLEYEKRLH
DTLIASFGPNTTGIVNAAIPSSASSSSSGSGTNGSSAGNAQQKEAWPSLSVSPINGKEAT
ASSNSSSGKSKREKVRNEKRHEKNKSKNKSGGNTNANASNKENYVPETRGSTSTETFAEA
TADAPASTKAEPPQASSNRSRVERVKDRASNHAAGAKEQKKGKEAAPAPAANKPVERVET
NESTITQKKAEVTDSCEDNLPQKRLAETNVQRSVSSCSETSEGHVSESSLSEKSLPGDYA
EEKCNSVNSESQQESVKSQEELEKSNEAIVEAETVLPAAESSEDISPAAVAPSNGKDEGC
LPVDPAEPSSLADNGSRVTDALSKLNIFDDTPSFFTSPSFQQAPILKNKIDLEMRQSHLP
DLVNDIDGIQKASNTNEWEEAFKNVMMRNTRHVEEQLLQQQQLQQQQKHHHQQVLHQQEE
FLRMHELQKRNNFATQINGPANDFLSHLQANSLDLNRAQAHAILQQQLLQQQAGENLFGG
NMSKFFDFHKNQQQSHHPYINGHPPQINGNSAVPEPQRVAAPLESNRLNSPFVENGLINS
QQQQQKQRMMGMYEFMPPNTQSQQNRFTQNSIVDDDLGFDPFVETQKGLAELMENEVVQQ
QSINIENPLPKLPPQPQVLPHQQLVDNLHRARMPPPGFNHVNALGLGGASRLQHTSKIMP
FMNMPVNGVGNNGAQGQHQIPMGVNWNAPLGMHQNAGQPVGDSQLQHPMAHNKVYNNSDW
TSMDPAILSFRQFSSFPQNQIPPHPQQQQDLFLQHLAQQQNSQSGGFNNQPQQLLPMGMP
NNLLNGQQTQPPQVNANVQGMLEFLKSRQFV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcctaagtagcaatgatgatgcagtcgagtgccctttgtgtatggagccgctt
gaggtggacgatctgaccttttttccgtgtacctgcggatatcagatttgccgattttgt
tggcataggatccgcacggatgagaacaagctgtgtccggcatgccgcaaggagtaccct
gagaatccagctgactttaagcctttgtcacaggaagaaatgattgccttcaagtcccag
aaacgccaaagggaccaacaacgaaaacaaaagatcaccgagaaccgaaaacatttggcc
aacgttcgcgtggtccaaaagaacttggtgttcgttgtgggcctaccacctcgacttgct
gatgcagacatattaaaaaaacacgagtatttcggtaaatatgggaaaattcataaagtc
gttataaatccaagtaccacgtatgccggggtccagggtccatctgcttctgcctatgtc
acttatgttaataactcggatgccttgcgggccattcaaagcgtcaataacattatgata
gacgggcggctcataaagaccagcttggggacaactaaatactgtagccacttcatgaag
aaccagcagtgtcccaagggcgactgcatgtacttacacgaattgggcgaccccgaggcc
agtttcacaaaggaggaaatgcatcagggaaagcacctggagtacgagaagcgcctgcac
gatactctaattgcctcattcggaccgaatacaacaggtattgtaaatgccgcgattcca
tcgtcagcgtcatcctcgtcctctggatcgggaacaaatggttcaagtgcaggcaatgcc
cagcagaaggaggcctggcccagtttatcggtctcgcccatcaatggcaaagaggccact
gccagttcgaacagttccagtgggaagagtaaacgggagaaggtgcgcaacgagaagagg
cacgagaagaacaagtcgaagaataaaagcggcgggaacacaaacgccaatgcctcgaac
aaggagaactatgttcccgaaacgagaggcagcacaagtactgagacattcgcagaggcc
acggcggatgcaccggcttccaccaaggcagaaccgccgcaagcctctagcaatcgatcg
agggtggagcgcgtaaaagatagggcctccaatcatgcggctggtgcaaaggagcaaaag
aagggcaaggaagctgctccagcacctgcagcaaataaaccggtggaacgggttgaaacg
aacgagagtacaataacacaaaagaaggcggaagtaaccgatagctgtgaagataactta
ccgcaaaagcgattagcggaaacaaacgttcaaagatctgtgagctcttgtagcgaaact
agcgaaggacacgtctctgagagtagcttaagtgaaaagagtttacctggtgattatgcg
gaggagaagtgcaatagtgtgaattctgaaagccagcaagaaagtgtgaagtctcaggag
gagctcgaaaagagcaacgaggctattgtcgaggctgaaacggttctgccagcagctgaa
tcctctgaggatatcagccccgctgcagtggcgcctagcaatggaaaagatgaaggatgc
ttacccgtagatccagccgaaccatcgagtctggcggataatggaagcagagtaactgat
gcgctgtctaagctcaacattttcgatgacacgcccagctttttcacatcgccatcattc
cagcaagcccccattttaaagaataagatagatttggaaatgcgacagtctcatttacca
gacttggtcaacgacattgatggaatccaaaaggcatccaatacaaatgagtgggaagaa
gccttcaaaaatgtgatgatgcgcaacactaggcacgtggaggagcaactgcttcagcag
caacaattgcaacagcagcagaagcatcaccaccagcaagtattgcatcaacaggaggag
ttcctacgcatgcacgaattacagaaacgcaacaactttgcgacgcaaatcaacggtcct
gcgaatgatttccttagccatttacaggcgaactcgctcgatttgaatagagcgcaagcc
catgcaatccttcagcaacaattattacagcagcaagcaggggaaaatctatttggcggt
aacatgtcgaagttctttgatttccataaaaatcagcagcagtcacaccatccgtatata
aatggacatccaccacaaatcaatggaaatagtgctgtgccggaaccccaaagagtcgcg
gcccctttggaaagcaatcgactgaattcgccttttgtcgaaaatggacttattaattcg
cagcagcagcaacaaaagcagaggatgatgggaatgtatgaatttatgcctccaaacacg
caatctcagcagaatcggttcacacagaactcgatagtcgacgatgacttaggattcgac
ccctttgttgaaacccaaaagggacttgctgaacttatggaaaatgaggttgtccaacaa
cagagtattaatatagaaaaccccttgccgaagttgccgccacagcctcaagttctccca
catcagcaactggtggacaacctgcaccgagctcggatgccgccaccaggctttaatcac
gtcaacgcattgggcttgggcggagcatccagactgcagcacaccagcaaaataatgccc
ttcatgaacatgcccgtcaatggagtgggaaacaacggtgcccaaggacagcaccaaata
ccaatgggtgtcaactggaacgcacccttgggcatgcaccaaaacgcgggacagcctgtg
ggtgactcgcaattgcagcatccaatggctcacaacaaggtttacaacaatagtgattgg
acttcaatggatccggctatactttcgtttagacagttttcttcttttccacaaaaccaa
attcccccacatcctcagcaacaacaggatttatttttgcagcatttggctcaacagcaa
aattcccagagtggtggtttcaacaaccagccacagcaactgcttcctatggggatgccc
aataatttgctgaacggacaacaaacgcagccgccacaggtcaatgccaatgttcagggc
atgcttgagtttttaaaaagccgtcaattcgtttag
DBGET
integrated database retrieval system
