Drosophila erecta: 6543875
Help
Entry
6543875 CDS
T01060
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X12
KO
K06823
collagen type XVIII alpha
Organism
der
Drosophila erecta
Brite
KEGG Orthology (KO) [BR:
der00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
der04147
]
6543875
00535 Proteoglycans [BR:
der00535
]
6543875
00536 Glycosaminoglycan binding proteins [BR:
der00536
]
6543875
Exosome [BR:
der04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
6543875
Proteoglycans [BR:
der00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
6543875
Glycosaminoglycan binding proteins [BR:
der00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
6543875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
6543875
NCBI-ProteinID:
XP_001971510
FlyBase:
FBgn0106658
UniProt:
B3NFJ4
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MAMVISTRAKLVITALILFFLLGIVLVTGSTKGWFNPNRYNGERVAARIQATDIFDASGM
QPPGQTQYSHERPYRGIKGEKGERGPKGDSIRGPPGPPGPPGPKGETAPYPPFVETTSAG
AKYTGECTCNASDILEAIKDNESLRESLRGAPGTPGKDGKPGTPGHTGATGVPGARGARG
SEGAQGLKGEPGVDGLPGVMGPPGPPGPPGLPENYDESLMVNSMGAFRGTTQPGAKGVPG
EKGDAGQKGERGDPGHKGAHGPSGAKGEPGEPGTPGLPGLPGQAGQPGGLEGLASANGTK
GERGEKGEKGMRGRRGGTGATGPIGPPGKPGPMGDIGHSGRPGMTGPKGEMGPKGPKGDS
GGREGIKGDKGDRGQDGRDGLPGPPGLPSTGGGDGDSGGVQYIPMPGPPGPPGPPGLPGL
SISGPKGEPGMDSRSSFFGDASYYGRPEPPRQPGHSHKHEEAQGIVDGEEPYFSASSSNM
NMKIVPGAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIATP
APPTTVAPSMRFDLQSKNLLNSPPPLLNTPTFTTAPEYETWYPRMLRVAALNEASTGDFQ
GIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRLADRDLPVVNTRGDVLFNSWKG
IFNGQGGFFSQAPRIYSFSGKNVMTDPSWPMKMVWHGSLPNGERSMDTYCDAWHSADHLK
SGYASNLDGHKLLEQKRQSCDSKLIILCVEALSQDRKRKKRDIGDGSSHGESESREFKTA
DEYAAHLENLLL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggttatatcaacgcgtgccaagctcgtgattaccgcgctgattctgttcttc
ctgctcggcatcgtcctcgtaacgggctccacaaagggatggttcaatcccaatcgctac
aacggcgaacgggtggcagctaggattcaggcgacagacatcttcgacgccagtggaatg
cagcccccaggacagacgcagtactcgcacgagagaccgtaccgcggcatcaagggcgag
aagggagagcgggggcccaagggcgacagcattcgcggtccgccgggaccgccgggtccg
cccggccccaaaggcgaaacggccccctatccgccctttgtggagacgacgagtgcgggg
gctaaatacactggcgagtgtacatgtaatgcgtctgatatcctagaggccatcaaggac
aatgagtcgttgcgggaatcgttgcgaggagcaccgggcacaccgggcaaggatggaaag
ccaggtacccctggacacaccggagccaccggagtgccaggagccagaggcgcccggggg
tccgagggtgcccaggggctgaagggcgagccaggcgtcgacggcctgcccggagtcatg
ggtccgccgggaccgccgggtccgcctggtttgcccgagaattacgatgaatccctaatg
gtcaactcgatgggcgcattccggggcacgacgcagccaggagccaaaggtgtgcccggc
gagaaaggtgatgccggccagaaaggagagcgtggcgatccgggtcacaaaggtgcacac
gggcccagcggcgcaaagggtgagcccggcgaaccgggaacacccggactgccgggattg
ccgggtcaggccggacagcccggcggacttgagggactcgccagtgccaatgggaccaag
ggcgagaggggcgagaaaggcgagaagggcatgcggggtcggcgcggcggtacgggtgcc
actggaccaattggaccgcccggaaaacccggacccatgggcgatattggacactcgggc
cgtcccggcatgacaggaccaaagggtgaaatgggtcccaaaggaccaaagggcgattcc
ggcggtcgcgaagggatcaagggtgataagggcgaccgaggtcaggatggacgcgatggc
ttgccaggacctccaggattaccctccactggtggaggcgatggcgacagcggcggtgtg
cagtacatcccaatgccaggacctccaggacctccgggaccaccaggcctgccgggactt
tccatttctggccccaaaggagagccgggaatggattcgcgaagctccttcttcggcgat
gcatcctactacggacgaccagagccaccacgccagccaggacattcccacaagcatgag
gaggcccaggggatcgtcgatggcgaggaaccatacttttcggcatcctcatccaacatg
aacatgaagattgtgcctggcgcagtcaccttccagaacatcgatgaaatgacaaaaaaa
tcggccctaaatccgccgggcacattggcctacatcaccgaggaggaggcgctgctggtt
cgcgtgaacaagggatggcagtatattgcgctgggaactttggtgcccattgccacgccc
gctccgcccacaacggtggcaccctcgatgcgattcgatctgcagtcgaagaacctgctc
aacagtccaccacccctgctcaatacgccaacgtttacaaccgcgcccgaatacgaaacg
tggtatccgcgaatgctacgcgtggccgcattgaatgaggcctccaccggtgattttcag
gggattcggggggcggacttcgcctgctaccggcaaggacgacgggcaggactcctgggc
accttcaaggccttcctctcttccagggtacagaatctggacaccattgtgcgtttggct
gaccgggatctgcccgttgtgaacactcgtggcgatgtgctcttcaactcgtggaagggc
atcttcaatggccaaggtggcttcttctcgcaggcgccgaggatctacagcttcagcggc
aagaatgtgatgacggatccttcatggcccatgaagatggtctggcacggctcgctgccc
aatggcgagcgctccatggacacctactgcgatgcctggcactcggctgaccatctgaag
tccggctacgccagcaatctcgatggccacaagctgctcgaacagaagcgccagtcctgc
gacagcaagctgatcatcctgtgcgtggaggcactttcccaggatcgcaagcgcaagaag
cgggacatcggcgacggcagcagtcacggagaaagtgaaagcagggagttcaagacggcc
gatgagtatgcagcgcatttagaaaatttactgctgtaa
DBGET
integrated database retrieval system
