Desulfuromonas soudanensis: DSOUD_0193
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Entry
DSOUD_0193 CDS
T04049
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
des
Desulfuromonas soudanensis
Pathway
des03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
des00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSOUD_0193 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
des03400
]
DSOUD_0193 (uvrB)
DNA repair and recombination proteins [BR:
des03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSOUD_0193 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSOUD_0193 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_16
UB2H
AAA_5
AAA_22
SWI2_SNF2
TrwB_AAD_bind
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ALC14993
UniProt:
A0A0M3QEV9
LinkDB
All DBs
Position
208962..210962
Genome browser
AA seq
666 aa
AA seq
DB search
MPRFELKSDYQPRGDQPQAIAELVAGIERGDPHQVLLGVTGSGKTFTMANVIAAVQRPTL
VLAHNKTLAAQLYGEFKELFPDNAVEYFVSYYDYYQPEAYVPVTDTFIEKDSAINEEIDK
LRHSATRSLLSRRDVLIVASVSCIYGLGSPEAYFGMLVRLETGMELDRNALLQQLVDIQY
ERNDIDFHRGTFRVRGDTVEIFPAYEDNRALRIEFFGDEIEGIAEIDPLRGAVMGRMEAT
IIFPARHYVATRPTLERGIRAIQDELLERIQYFRSRNMLVEAQRIEQRTLFDIEMMEEMG
YCQGIENYSRFLDGRKPGEPPATLFDYFPDDALMFIDESHVSVSQIGAMYRGDRSRKETL
VNYGFRLPGALDNRPLTFEEYEAKGVQTIFVSATPADYELAKAQGVVVEQIIRPTGLVDP
PIEVRPAKNQVDDLLHELRETLRQGYRVLVTTLTKRMAEDLTGYFEELGVRVRYLHSDIH
TVERMEIIRDLRRGVFDVLVGINLLREGLDLPEVALVAILDADKEGFLRSARSLIQICGR
AARNVDGRVIMYADRVTRSMQTCIDETGRRRQTQLAYNEEHGITPESVKKSLRTILEDIA
EKDYLEVPLVAEREEDYLSPAEMKKEMARLKGEMLAAAADLEFEKAAELRDRLLALERRE
LGLAGK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcttcgaactcaagtccgattaccagccgcgaggcgatcagccccaggccatc
gccgagctcgtcgccggaattgagcgcggcgacccccatcaggtcctcctcggcgtcacc
ggctcgggaaagaccttcaccatggccaacgtcatcgccgccgtgcagcggccgaccctg
gtcctggcgcacaacaagaccctcgccgcccagctctacggcgagttcaaggagctcttt
cccgacaacgccgtcgagtatttcgtctcctactacgattattatcagcccgaagcctac
gtccccgtcaccgacaccttcatcgagaaggattcggcgatcaacgaggagatcgacaag
ctgcgccacagcgccacccgctccctcctctcccggcgcgacgtgctcatcgtcgccagc
gtctcctgcatctacggcctcggctctcccgaggcctatttcggcatgctggtgcgcctc
gagaccgggatggagcttgaccgcaacgcccttctgcagcagctggtggacatccagtac
gagcgcaacgacatcgattttcaccgcggcaccttccgggtgcggggggatacggtggag
atcttccccgcctacgaggacaaccgggcgctgcgcatcgagttcttcggcgacgagatc
gaagggatcgccgaaatcgacccgctgcgcggcgcagtcatggggcgcatggaggccacc
atcatcttccccgcccgtcactacgtcgccacccggccgaccctcgaacgggggatccgg
gcgattcaggacgagctgttggagcgcattcagtacttccgcagcaggaacatgctcgtc
gaggcgcagcgcatcgagcagcgcaccctcttcgatatcgagatgatggaggagatgggg
tactgccaggggatcgagaactactcccgcttcctcgacggccgcaaacccggggagccg
ccggcgaccctctttgactacttccccgacgacgccctgatgttcatcgacgagagccac
gtctccgtctcccagatcggcgccatgtaccgcggcgaccgctcccgcaaggagaccctg
gtcaactacggcttccgtctccccggcgccctcgataaccgcccgctgacctttgaggag
tatgaggccaagggggtgcagaccattttcgtctcggccactcctgccgactacgaactg
gccaaggcgcagggggtggtggtcgagcagatcatccgccccacgggtctcgtcgacccg
ccgatcgaggtgcgtcccgccaaaaaccaggtcgacgacctcctccacgaactgcgcgag
acgctccgccaggggtaccgcgtcctggtcaccaccctcaccaagcgcatggccgaggat
ctcaccggttatttcgaggagttgggggtccgggtgcgctaccttcattcggatatccac
accgtcgagcggatggagatcattcgcgacctgcgccgcggggtcttcgacgtgctggtg
gggatcaacctgctgcgcgaaggcctcgacctccccgaggtcgccctggtggcgattctc
gacgccgacaaggaaggttttttgcgcagcgcccgctccctgatccagatctgcggccgc
gcggcgcgcaacgtcgacggccgggtgatcatgtacgccgaccgggtgacccgctccatg
cagacctgcatcgacgagaccggccgtagacggcagacccagctcgcctacaacgaagag
cacggcatcacccccgagtcggtgaagaagagtctgcgcacgatcctcgaggatatcgcc
gagaaggattatctcgaggtgccgctggtggccgagagggaagaggactatctctccccg
gcggagatgaagaaggagatggcgcggctgaagggggagatgctcgccgccgccgccgat
ctggagttcgagaaggcggctgagttgcgggaccgcttgctggcgttggagaggagggag
ttggggctggcgggaaaataa
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