KEGG   Dehalogenimonas sp. WBC-2: DGWBC_0734
Entry
DGWBC_0734        CDS       T03938                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
dew  Dehalogenimonas sp. WBC-2
Pathway
dew03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    DGWBC_0734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dew03400]
    DGWBC_0734
Enzymes [BR:dew01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DGWBC_0734
DNA repair and recombination proteins [BR:dew03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     DGWBC_0734
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: AKG53409
UniProt: A0A0F7GDW9
LinkDB
Position
complement(695945..696958)
AA seq 337 aa
MDRADMFDLAHLTGARKAPMPGRLPPMLATLTEKPFNDPDWYFEPKLDGYRLIASVNSGQ
VRLQSRNFHDYTVQFPAVAAEMATQPVDMALFDGEIVALDEQGRPCFQCLQHHIKKNPGN
SGGVMLKYYVFDLLYLNGYDLTEVPQSSRVKCLDKTIKTGSTVKAVRRFEGDGQEIFSAS
VKSGFEGIIAKNKHATYRPGKRSADWLKIKAVLTDEFVIIGYTPGQGTRDGSFGALVLAQ
YDLNGHLVYSGNVGTGFDEALLNDLMIQLEELTTKKAPSNLQLPLPSAITWVKPELVAEI
KFAERTQGGLLRAPVFLRLREDKEAPEVKTPVVEAKL
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggacagggcagatatgtttgatcttgcccacttgaccggtgcccggaaagctccgatg
ccggggcgtctgccgcctatgttagccaccctgaccgaaaagccgttcaatgaccctgat
tggtattttgaacccaagctcgacggttatcgcctgatagcatcagtcaactccgggcaa
gtaagattacaatcgcgcaattttcatgattataccgtccaatttcccgccgttgccgca
gaaatggcaacccaaccggtagatatggctctttttgatggtgaaatagttgcgctggat
gaacaaggccggccttgtttccagtgtctacagcatcatattaaaaagaatccggggaat
tcgggcggcgtaatgctgaagtactacgttttcgaccttctgtacctgaatggttacgat
cttactgaggtgccacaatcctcccgggtcaagtgtcttgataagaccataaaaactggc
agtacggtaaaggcggtacggcgatttgagggcgacggtcaggaaatattttctgcctca
gtaaaaagcgggtttgagggtataatagcaaaaaataaacatgcaacctaccgccctggg
aagcgttcagcagactggctgaaaataaaagctgtgttgaccgatgaatttgtcatcatc
ggttatacaccagggcagggtacccgcgacggcagtttcggcgcgcttgtacttgcccaa
tatgatctgaatggacatctggtttattccgggaatgtcggtaccggctttgatgaagcc
cttctcaatgatctgatgattcaattggaagaactgacaaccaaaaaagctccatctaac
ttacagctaccgctcccgtctgctatcacctgggttaaacccgagcttgtagccgagata
aaatttgctgaacgcacacaaggcgggttattacgggcgccggtattcctaagattgcgg
gaggataaggaagcgccggaagttaagaccccggtggttgaagcgaagctatag

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