Cavenderia fasciculata (cellular slime mold): DFA_01113
Help
Entry
DFA_01113 CDS
T02668
Name
(RefSeq) NOT2/NOT3/NOT5 family protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DFA_01113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_01113
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DFA_01113
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DFA_01113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
FapA
Motif
Other DBs
NCBI-GeneID:
14872665
NCBI-ProteinID:
XP_004359088
UniProt:
F4PQX3
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MNVRKLQGEIDKTIKKVGDGVIEFDSILKKVYSATSSNQREKYEGDLKKEIKKLQRYRDQ
IKGWISNNEVKNKTPLVDCRKLVEQKMEQFKVCEKESKTKAYSKEGLGGAIAKDSDTKIQ
VRYWTSKAISNLKTQIDQFETDIDNIQNAQRKRKTDSSGKLEVIQKHLERHKHHYRALDY
LARVMESDRVAADEIDRLKESVEYYIENYEDENCEEPDDIYGGFNLKITEDGDEYDITID
ESESDIDDDDDIDDSSDETTNEDNDEINNNLNLIGDDGNYNISSVKDIKPPQNISTPPPL
INNSSIGSSSSIGSSSSIGSSSNNPRMPSPTTVLQQQQQPTSRNSPSPTILSNPSVVAIP
QQSNHNVQSKQSNVNVKQQQQQQQQQQLQQQPLTPNTMYPSSLGNIPMSQRLQQAQIQQQ
QQQQQQLQQQQLQQQQQQQQLHQNKDAQIQMMQQLIQQQQLQQQQQQYGGMRKSQPSYQQ
QPRSSMDDLNELKDGMSQINLGKQHISPPHSSPPIYDQSGNIIGGSGDDTKNNETFDSGS
NFYPGTLAELSSATMSRIGTNDNSSNQMLHQQMLLQQQQLQLQQQQQQQLQHQQLHQAQQ
VQQQQQLHFQQQQQQQQAQQGNLENSIRQYEDNLSITRIMMETSFKNLPDYKDYERLPPY
MPKTQKLQTPNYYPQHPLPLFENPIVYEKFDIDTLFFIFYFKQGTYQQFLASRELKKQGW
RYHKKYLTWFRRHEEPKYITTEYEQGTYVYFDYETGWCQRKKTEFTFEYRYLEE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttaggaaattacaaggagagattgataagactattaaaaaagtaggagatgga
gtaatagaatttgattctatattgaaaaaggtttattcagcaactagtagcaatcaaaga
gaaaagtatgaaggtgatttgaaaaaggagattaaaaagttacaaagatatagagatcaa
atcaaaggttggataagtaacaatgaagttaaaaataaaactcctcttgttgattgtaga
aaattagttgaacaaaaaatggaacaatttaaagtatgtgaaaaagaatcaaaaactaaa
gcatattcaaaagaaggattgggaggtgccattgcaaaggatagtgatacaaagattcaa
gttagatattggacaagcaaagctatatcgaatttgaaaacacagattgatcaatttgaa
accgacattgacaatatacaaaatgcacaacgcaagcgaaagactgatagttctgggaag
cttgaagtcattcaaaagcatcttgaacgtcataaacaccattacagggcactcgactat
ttggcccgtgtcatggaatcggatcgtgtcgctgccgatgaaatcgatcgactaaaggaa
agtgtagaatactatatcgaaaactatgaagatgaaaattgtgaagaaccagacgatatc
tatggtggttttaatctaaaaatcactgaagatggtgatgaatatgatatcactatcgat
gaatctgaatctgatatcgatgatgatgatgatattgatgattcttcagatgaaactaca
aatgaagataatgatgaaattaataataacttgaatttaattggagatgatggaaattat
aatatttcttctgtaaaagatattaaaccacctcaaaatatttctactcctcctcctcta
attaataatagtagtattggtagtagtagtagtattggtagtagtagtagtattggtagt
agtagtaataatcctagaatgccatcaccaacaacagttttacaacaacaacaacaacca
acttctagaaattcaccatctccaactatattatcaaatccttctgttgtagccattcca
caacaatcaaatcataatgtacaatctaaacaatcaaatgtaaatgttaaacaacaacaa
caacaacaacaacaacaacaattgcaacaacaacctttgacaccaaatacaatgtatcca
tcatctttgggtaatattccaatgtctcaaagattacaacaagctcaaattcaacaacag
caacaacaacaacaacagttacaacaacaacaattgcaacaacaacaacaacaacaacaa
ttacatcaaaacaaggatgcacaaattcaaatgatgcaacaattaattcaacaacaacaa
ttacaacaacaacaacaacaatatggaggaatgagaaaatctcaaccatcttatcaacaa
caaccaagatcttcaatggatgatttaaatgaattaaaagatggaatgtcacaaattaat
cttggtaaacaacacatttcaccacctcattcttctccaccaatctatgatcaaagtggt
aatattattggtggtagcggtgatgataccaaaaacaatgaaacttttgattctggttca
aatttctatcctggtactttggctgaattatcatctgctaccatgtctagaattggtaca
aatgataacagtagtaatcaaatgttacatcaacaaatgttattacaacaacaacaatta
caattacaacaacaacaacaacaacaattgcaacatcaacaattacatcaagctcaacaa
gttcaacaacaacaacagttacattttcaacaacaacaacaacaacaacaagctcaacaa
ggtaatcttgaaaattcaattagacaatatgaagataatctttcaataactagaataatg
atggaaactagttttaaaaatttaccagattataaagattatgaaagattgccaccatat
atgccaaaaacacaaaaattacaaacaccaaattattatcctcaacatccattaccatta
tttgagaatccaattgtttatgaaaagtttgatatcgatacattatttttcatcttttat
tttaaacaaggaacctatcaacaattcttggcatcgagagaattgaaaaaacaaggttgg
agatatcacaagaaatacctaacttggtttagaagacacgaagaaccaaaatacattaca
accgaatatgaacaaggaacttatgtctactttgactatgaaactggttggtgccaaaga
aagaaaactgaatttacttttgaatatagatatttagaagaataa
DBGET
integrated database retrieval system
