Cavenderia fasciculata (cellular slime mold): DFA_10656
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Entry
DFA_10656 CDS
T02668
Symbol
msh5
Name
(RefSeq) mutS like protein
KO
K08741
DNA mismatch repair protein MSH5
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_10656 (msh5)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Meiosis-specific proteins
Others
DFA_10656 (msh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
14866745
NCBI-ProteinID:
XP_004351299
UniProt:
F4QB11
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MSNKKKKNNSNSIINDIQLGLDEDEDEIEDDDDYDTADRGGGTTTRNTTLSAAINWIDNE
FPDQLLIQQYEKGRVGGEGLGGLGGLGNNKSQFKTPTTTPKSRSTTVTPKAPIIHGTSTT
TTTNSIRKPTTLSSSSLLLSSSTLKSGVSSSSISSSIKSEQIIKNTPPSFQNDNNRNGNS
GNSNSRPTLAVIYNKLKLGIAYYDHMTSTLSMSESWEDDSFNCLTILKQQIKPKMIIVPS
RMPQKFIDQINLNETPEYESVIYTAKQSDFDYDLGKTRLFNLKLPCQDDFHAKSHYLETQ
IKATSGLLSYLSKFLALDEFETLENLQINEIQHISLDQYLHMDINSLYSLQIFSNEQHPS
CYSFGNSKEGLSLFGILNKTKSKIGKRMLKSWFMRPSRQRTIIEDRLDVIEWLLDQSQST
IIQELLVSIGNIRDLHMILNRLSLSQSPCNDLISIYNTLYNYFQIITIIENSPDTPNLIK
GTHIALDSIKDLFEHFENTFSLEHILKFRQLYIRDGFDQQLDKLREVFNSMSSILTNTGE
IEKTKFSRITWIESFHFVYYPQLGCLICIPISHTVPIQTQKNIKGLKFLFQTSQYIYFQN
EKTKELDEYFGDIHHDIIDIQSRIERSIVDKVLENVSQLVAICNYCSQLDCFISLALASK
ELNFVKPTINNEHRINIVNGRHPLQEICVQTFIPNDTKINTIDNIDNNINNNNNEKKQFL
FITGPNQSGKSIYLKQVAIIVFLTHLGCFVPASSADICLCDRIFTRVSSRESCMVSESSF
MIDCKQISQMTRFSTSNSLLIIDEFGKGTNPKDGISILYSLIEFLLFKDNAPITLMCTHF
YELFDLFTPEMNNQILFNSMEFIIDDSNSLGLDISNYIPLYKLINKKSTQSFGLTCAMNA
GVSKDILIRTMEIIKHQMKFKTINCNYFEPLPTTEKESNRIQFYNQLLDSFSHIEDNLQS
ITPSLENLLNLIKSRNDIENDKDTREE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaaaagaagaagaataatagcaatagtataatcaatgatattcaacttggt
ttggatgaagatgaggatgaaatagaggatgatgatgattatgacacagcagatagagga
ggaggtacaactactagaaatactacactttctgctgcgattaattggattgataatgaa
tttcctgaccaattattaatacaacaatatgaaaagggtagagtaggtggagaaggatta
ggaggattaggaggattaggtaataataagagtcaatttaaaacacctacaacaacacca
aaatcaaggtcaacaaccgttacacctaaagctccaataattcatggtacctcgaccacc
actactacaaattcaattaggaaaccaacaacattatcatcgtcgtctttgttgttgtcg
tcgtcgacattaaagagtggtgttagtagtagtagtatttcttcatctattaaatctgaa
caaattataaagaatacacctccatcttttcaaaatgataataatcgtaatggtaatagt
ggtaatagtaatagtagaccaacattggcagttatttataacaaattgaaattaggtatt
gcttattacgatcatatgacatcaaccttgtcaatgagtgaaagttgggaagacgattct
tttaattgtttaactattttaaaacaacaaattaaaccaaagatgattattgtaccttca
agaatgccacaaaagtttattgatcaaatcaatttaaatgaaacacctgaatatgaaagt
gttatctatacagccaaacaatctgattttgattatgatcttggaaagactagattgttt
aatctaaagttaccatgtcaagatgatttccatgcaaaatctcactaccttgaaactcaa
attaaagcaacaagtggattattatcttatttatctaaatttttggcattggacgaattt
gaaacattagagaatttacaaatcaatgaaattcaacatatttctttagatcaatattta
catatggatataaattcattatattcattacaaatattttcaaatgaacaacatccaagt
tgttattcatttggaaattcaaaagaaggtttaagtttatttgggatattaaacaaaaca
aaatcaaaaattggtaaaagaatgttaaaatcatggtttatgagaccatcaagacaaaga
actattattgaagatagattagatgtaatagagtggttattggatcaatcacaatctaca
atcattcaagaactattagtttcaattggaaatattagagatttacatatgatattgaat
agattatcactttctcaatcaccttgtaatgatttaatttcaatctataatactctttac
aattattttcaaattataacaataattgaaaattcacctgatacacccaatttgattaaa
ggaacacatatagcattggattcaattaaagatttgtttgaacattttgaaaatacattt
tcattggaacatatattaaaattccgtcaactttatattagagatggatttgatcaacaa
ttggataaattaagagaagtttttaattcaatgagttcaattttgacaaatacaggagaa
atagaaaaaaccaaattttcaagaataacatggatagaatcatttcattttgtttattat
ccacaattgggatgtttaatatgtatccctatttctcatacagtaccaattcaaactcaa
aaaaatattaaaggtttaaaatttttgtttcaaacatcacaatatatttattttcaaaat
gaaaaaacaaaagaattggatgaatattttggtgatattcatcatgatattattgacatt
caatcaaggattgaaagatcaatcgttgacaaggtactcgaaaatgtttcacaattggta
gcaatttgtaactattgttcccaactcgattgttttatttcacttgctctggcctccaaa
gagttgaattttgtcaaaccaacaatcaacaatgaacatcgaatcaatattgtaaatgga
agacatcctcttcaagaaatttgtgttcaaacttttattccaaatgatactaaaattaat
acaatagataatattgataataatattaataataataataatgagaaaaaacaatttcta
tttattacaggaccaaatcaaagtggtaaatcaatttatttaaaacaagttgcaatcatt
gtatttttaactcatttggggtgttttgttcctgcaagctctgctgatatttgtttgtgt
gatagaatatttacaagagtatcatcaagagaaagttgtatggtatcagagtcatcattc
atgattgattgtaaacaaatatcacaaatgactagattttcaacttcaaactctttatta
attattgatgaatttggaaaaggaaccaatccaaaagatggaatttcaatattatattca
ttgattgaatttttattatttaaagataatgcaccaattacactaatgtgtactcacttt
tatgaattgtttgatttgtttactcctgaaatgaacaatcaaatattatttaattcaatg
gaatttattattgatgatagtaatagtcttggattagatatttcaaattatattcctctt
tacaaattgattaataaaaaatcaactcaaagttttggtttaacatgtgcaatgaatgca
ggagtttcaaaggatatattaatacgtacaatggaaattatcaaacatcaaatgaaattt
aaaaccatcaattgcaactattttgaaccgttaccaaccaccgaaaaagaatccaatcgt
atacaattttacaatcaattgttggattcattttcacatatcgaagataatttacaatct
attactccatcacttgaaaatcttttaaatctaattaaatcaagaaatgatattgaaaat
gataaagacaccagagaggaataa
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