Deinococcus ficus: DFI_15475
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Entry
DFI_15475 CDS
T05674
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
dfc
Deinococcus ficus
Pathway
dfc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DFI_15475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfc03400
]
DFI_15475
DNA repair and recombination proteins [BR:
dfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DFI_15475
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DFI_15475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_16
DUF4350
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ASN82574
UniProt:
A0A221T103
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Position
pDFI1:complement(404078..406609)
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AA seq
843 aa
AA seq
DB search
MTGFPGDTESGFVQVRGAREHNLKDVSVRIPRDALVVFTGVSGSGKSSLAFGTLYAEAQR
RYLESVSPYARRLFHQVGVPDVDAIEGLPPAVALQQQRGTPTARSSVGSVTTLSNLLRML
YSRAGDYPAGQGIVYADGFSPNTPEGACPECHGLGRVYTVTEASMVPDPSLTIRERAIAA
WPAAWGGQNQRDILVTLGIDVDVPWRDLPQETRDWILFTDEQPVVPVYPGFTPAETRRAV
KRKLEPGYMGTFSSARRHVLHTFANSESASMKRRVQAYMIAEDCPLCHGKRLRQEALAVT
FTGLDITEFSRLPLRQVMERLRPYAEGSDPGHAERAAHRPEQAIALQRMSEDLARRLEVL
LDLGLGYLQLERATPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLAA
LTGLKRGGNSLFVVEHDLDVIRRADWLVDVGPGAGERGGEIVYSGPPEGLRAVHASSTAR
YLFAQPGPEQQAPRDPVGWLELNHVHRNNLQGLSVRFPLGVLTSVTGISGSGKSTLVSQA
LVEALADHFGHPAQPAGEEDEDAAPGGTAQLGGDLAQLSRLVWVDQKPIGRTPRSNLATY
TGLFDHVRRLFAGTPLARQRGYSAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCP
VCHGARYNAETLEVQYRGRNVAEVLGMTVDAAHAFFEGEGPVARALDTLQEVGLGYLRLG
QPATELSGGEAQRIKLATELGRSLRGGTVYVLDEPTTGLHPADVDRLQRQLARLVDAGNT
VIVVEHRMQVVAASDWLIDMGPGAGDEGGQAVAQGRPADVARVPGSRTAPYLRLALGHPP
VEG
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgactggctttcctggggatactgaaagcggcttcgtgcaggtgcgcggcgcccgcgag
cacaacctgaaggacgtgtcggtccggattccgcgggacgcgctggtggtgttcacgggc
gtgtccgggtcgggcaagtcctccctggcgttcggcacgctgtacgccgaggcgcagcgc
cggtacctggagtcggtctccccgtacgcccggcggctttttcatcaggtgggcgtgccg
gacgtggacgccatcgagggtctaccgcccgccgtggccctgcagcagcagcgcggcacg
cccacggcgcgctcgtcggtgggcagcgtcacgaccctgtcgaacctgctgcgcatgctg
tactcgcgcgccggggactacccggcggggcagggcatcgtgtacgccgacgggttttcc
ccgaacaccccggagggcgcctgcccggagtgtcacgggctggggcgggtgtacacggtg
acggaagcgtccatggtcccggatccgtccctgaccatccgggagcgggcgatcgcggcg
tggccggcggcatggggcgggcagaaccagcgggacatcctggtgacgctgggcatcgat
gtggacgtgccgtggcgggatctgccgcaggaaacgcgcgactggattctcttcacggat
gagcagcccgtcgtgccggtctacccgggcttcacccccgcggagacgcggcgcgcggtg
aagcgcaaactggaacccgggtacatgggtaccttcagcagcgcgcgccggcacgtgctg
cacaccttcgcgaacagcgagagcgcgtcgatgaaacggcgcgtgcaggcctacatgatc
gccgaggactgcccgctgtgccacggcaagaggttgcgccaggaggccctcgccgtgacg
ttcaccgggctggacatcacggagttctcgcggctgcccctgcgtcaggtgatggagcgg
ctgcgcccgtacgccgagggaagcgacccggggcacgccgagcgggcggcgcaccggccc
gagcaggccatcgcgctgcagcgcatgagcgaggaccttgcccgccggctggaggtgctg
cttgacctgggcctggggtacctgcagttggagcgggccacgcccacgctctcgccgggg
gagttgcagcgcctgcggctcgccacgcagctgtactcgaacctgttcggcgtggtgtac
gtgctggacgaaccctccgcgggcctgcatccggcggacaccgaggcgctgctcgccgcc
ctcaccggcctgaaacgcggcggcaactccctgttcgtggtggaacacgacctggacgtc
atccgccgcgccgactggctggtggacgtggggcccggtgccggggagcggggcggggag
atcgtgtacagcggcccgccggaagggctgcgggccgtccatgcctcaagcacggcccgg
tacctgttcgcgcagcctggcccggagcagcaggcgccgcgtgaccctgtcgggtggctg
gaactcaatcacgttcaccgcaacaacctgcaaggcctcagcgtgcgcttcccgctgggc
gtgctgaccagcgtgaccggcatttccgggtccggcaagtccaccctggtgagtcaggcg
ctcgtcgaagcgctggctgaccacttcgggcatcccgctcagccggccggagaggaggat
gaggacgccgcgcccggcggcaccgcgcagctcggcggggacctcgcacagctgtcccgg
ctggtgtgggtggaccagaaaccgattggccgcacgccacgcagcaacctggcgacgtac
acgggcctgttcgatcacgtccgccggctgttcgcgggcacgcctctggccaggcagcgc
gggtacagcgccggacggttttccttcaacgtgaaggggggacgctgcgagcactgccag
ggcgaggggtgggtgatggtggaactgctgttcctgccgagcgtctacgctccctgcccc
gtctgccatggggcgcgctacaacgccgagacgctcgaggtgcagtaccggggccgcaac
gtcgccgaggtgctgggcatgacggtggacgccgcgcacgcgttcttcgagggggagggg
ccggtggcccgcgcgctggacaccctgcaggaggtggggctcgggtacctgcggctgggt
cagccggccacggaactgtcgggcggggaggcgcagcgcatcaagctcgccacggaactt
ggccggagcctgcggggcgggacggtctacgtgctcgacgaacccacgaccgggctgcac
cccgcggacgtggaccgcctgcagcggcagctggcccgcctggtggacgccgggaacacc
gtgatcgtggtggagcaccgcatgcaggtcgtcgcggcgagcgactggctgatcgacatg
ggccccggcgccggtgacgaaggcgggcaggcggtggcgcagggccggccagcggacgtg
gcccgggtgcccggcagccgcacggcgccctacctgcgcctggcgctcgggcacccgccc
gttgaggggtag
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