KEGG   Desulfurococcus amylolyticus DSM 16532: Desfe_0226
Entry
Desfe_0226        CDS       T02136                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dfd  Desulfurococcus amylolyticus DSM 16532
Brite
KEGG Orthology (KO) [BR:dfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfd03400]
    Desfe_0226
Enzymes [BR:dfd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desfe_0226
    5.6.2.6  RNA 3'-5' helicase
     Desfe_0226
DNA repair and recombination proteins [BR:dfd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Desfe_0226
SSDB
Motif
Pfam: DEAD_assoc DEAD Lhr_WH Helicase_C ResIII
Other DBs
NCBI-ProteinID: AFL66137
UniProt: I3XQB3
LinkDB
Position
complement(204891..207551)
AA seq 886 aa
MGKTTISVFNGDFTVAEAMDRLRPYVKEWFTRKYREPTPVQRKTIPLVKEGFNILVSSPT
GTGKTLAVFLGIIDNIYKQYEETGKMPDGIYVVYVSPLRALNNDMRKNLLEPIEGIVNEA
RRMGLELPPIKIAVRTSDTTQSEKQRMNRDPPHILITTPESLAISLNAPKFREKLANTRI
LVVDEIHELASSKRGSHLAVSIERLENLAGRPLQRIGLSATISPLEEVALFLAGYNDKGE
PRDCFIVDARFDKKMDIRVISPIRDLARASAEEINESIYGELKKIISRHRTTLVFTNTRS
ATERVVFKLRKIFEKEGVIDIDDIEAHHSSLSRDTRVEIENKLKNGELRAIVSSTSLELG
IDIGYIDIVVLLSSPKSVTRLLQRIGRAGHHIREVSKGRIIVVDRDDLLECTVLSKLALE
RKIDRIRIPRNPLDVLAQHIVGMALERKWRIDEAYRLVKRTYTFHDLSYDDFLSTLRYLA
GQLGDFYEYQRVYSKIWLDEEEGVFGRKKSTRMIYYQNIGVIPDESKAHVFTVDNKYVGD
LEEGFVEYLSQGDLFVLGGRVYEYLYSKGLKVVVKPADGQRPTVPSWFSEMLPLSYDSAR
EVGRFRRVIAEMLDEKDREEVVEYLVKEYKLQKHAAETICDYIMDQKLYTKGLVPSDKLI
LIEIYDEPTRRNIIVHSIFGRKANDALARLYAYTVGQRLGVNIRLTVTDNGFMLTIPGHP
QGEWVEWFKSIPLDQAWDMLERIIRKTDLLKRRFRHTAVRSFMLLRKYRDTEKSVNRLQV
NAEELLKAVEEIQGFPVLKETYREILMDYMHIDEAIEVLSKVRNGEIGVALLGPLDVPSP
FAHSIVVHGYSDVVLMEDMRRMLIRLHELVKERLSSSNMDTWNTVN
NT seq 2661 nt   +upstreamnt  +downstreamnt
gtggggaaaacgactataagcgtatttaatggggatttcacagttgcagaggccatggat
agattaagaccatatgtaaaggaatggttcaccaggaaatacagggaaccaacgccagtt
cagaggaagaccatacctctcgttaaagaagggtttaacatactggtttcaagccccact
ggaaccggtaaaaccctggcagtcttcctcggtataatagataatatctacaagcaatat
gaggaaacaggtaagatgcccgacggcatttacgtggtatatgtgagcccgcttagagca
cttaacaacgatatgaggaagaacctgttggaaccaattgaaggcattgttaacgaggca
aggcgcatgggactggaactcccccctataaagatagctgttagaaccagcgataccact
cagagcgagaagcaacgcatgaacagggatcccccgcacatattgataacgacccctgag
agccttgcaatatcgttgaatgcccctaagtttagggagaagctggcgaacactaggata
ctcgtggtcgacgaaatacatgaactagcctcaagtaagagggggagtcatctagctgta
agtatagagagacttgagaacctagctggaaggcctctccaaagaattgggttaagcgca
acgatatctcctcttgaagaagttgcattattcctagccggttacaatgataaaggagag
cccagggactgctttatagttgatgctagattcgataagaagatggatataagggttatc
tccccaatcagggatttagcgcgagcatccgccgaggaaatcaatgagtcaatatatgga
gagctgaagaagataatatcaaggcaccgtacaacactagtattcaccaacactaggagc
gctaccgagagagtagtattcaagctcaggaagatctttgagaaggagggggtaatagat
atagatgatatagaggcacaccatagtagtctaagcagggataccagggttgagatagag
aataagcttaagaacggggaattaagagccatagtgagctcgacatcactggagctcggg
atagacataggctacatcgatatcgttgtcttgcttagctcccctaagagcgttacaagg
cttctacagagaattgggagagctggacaccatatcagggaggttagtaagggtaggata
attgtagtagaccgcgacgacctacttgagtgcactgtactatctaaactagccctcgag
aggaagatagataggatcaggataccgcgtaatccacttgacgtcctcgcccaacacatc
gttggaatggcgttagagcggaaatggaggatcgatgaagcctacagacttgtgaagaga
acatatacatttcatgatctaagctacgacgacttcctctcaacgctgagatacctggct
ggacaactgggagatttctatgagtatcaaagagtctactccaagatatggctggatgaa
gaagaaggcgtattcggcaggaagaaatccacacgaatgatatactatcaaaacataggg
gttataccagatgaaagtaaggcgcacgtgttcactgtggataataagtatgttggagac
ctcgaggaaggattcgtagagtacttatcacagggagacttattcgtgctaggtggtaga
gtatatgagtacctatatagcaagggtctcaaggtcgtggttaagccggctgatggacaa
agacccacagttccctcctggttcagtgagatgctgcccctctcctatgactcagctagg
gaggttggacgctttagacgtgtaatcgctgaaatgcttgatgagaaggaccgtgaagaa
gtggttgagtaccttgttaaggagtataagttgcaaaaacatgcggctgagactatttgc
gactacataatggatcaaaagctctatacaaagggactcgtgccctcagataaattgata
cttatagaaatatatgatgagccaacacggagaaacataatcgtacactcgatctttgga
cgaaaagcaaacgacgcgcttgccaggctatatgcttacaccgtggggcagagactaggg
gtgaatatcaggttaacggtaaccgataacggcttcatgctcacgatccccggtcaccca
caaggcgaatgggttgagtggtttaaatcgataccactggatcaagcgtgggacatgctg
gagagaattattagaaaaacagatctactcaaacggaggttcaggcatactgctgtcagg
agctttatgctattgagaaaatacagggatacggagaaaagcgttaacaggctacaggtt
aatgctgaggaattactgaaggccgtcgaagagatacagggatttccggttctcaaggag
acttatagggagatcttaatggattacatgcatatagatgaagcaatagaggtccttagt
aaggtcagaaacggggagataggggtagcactactaggaccacttgatgtaccaagtccc
ttcgcgcatagcatagtcgtgcatggatacagtgacgtggtgttaatggaggatatgcgt
agaatgcttataagactccacgagctcgttaaggagaggttatccagctctaacatggat
acgtggaacaccgttaattaa

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