KEGG   Desulfotomaculum ferrireducens: B0537_09850Help
Entry
B0537_09850       CDS       T04823                                 

Definition
(GenBank) DNA polymerase domain-containing protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
dfg  Desulfotomaculum ferrireducens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dfg00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    B0537_09850
Enzymes [BR:dfg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B0537_09850
DNA repair and recombination proteins [BR:dfg03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     B0537_09850
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2027458..2028366)
Genome map
AA seq 302 aa AA seqDB search
MPTATATEVLIEGKNIKLTNLNKLMWPEGLTKAHLVKYYTDIAPYLLPYMKGRPLVMKRY
PNGIQGEYFYQKECPTYAPAWLQTVSIPHGGKIVNYIMCEDTATLVWLANQGCIEMHAWL
SQKHSIENPDLAIIDLDPGEAASFSDVMEVAMVVKKALDQLNIKGYPKTSGASGIHIFIP
IKAVYTFREVTKAMGLIARLVTNALPHKATIERSLDKREADKVYVDYLQNTRGKSMAWTY
SLRPLPGAPVSTPLLWEEIEEQRVLPGHFNISTIFQRLKVFGDLHQSMLKNPQSISHILD
LE
NT seq 909 nt NT seq  +upstreamnt  +downstreamnt
atgccaacagctactgccacagaggtactaatagaggggaaaaatattaagcttaccaat
cttaacaaattaatgtggccagaaggcttgaccaaagcccatttagtaaagtattatacg
gacattgcgccctatctcttgccctatatgaaaggtcgtcctctggttatgaaaaggtat
cccaatggtatccaaggggagtacttttaccagaaggaatgtcccacttatgctccggca
tggttacagaccgtgagcattccccatgggggtaaaatagttaattacataatgtgtgaa
gatactgccactttagtttggctggccaaccagggttgtattgaaatgcatgcttggctc
tcgcaaaagcatagtatagaaaatcccgatctggccattattgatttggatcctggggaa
gcagccagtttttctgatgtcatggaagtggcgatggtggttaaaaaggccttggatcaa
ctaaatattaagggttatcccaaaacttccggcgccagtggcattcatatctttattccc
attaaagccgtttacacctttcgggaggtgactaaggctatgggtttaatagcccgcctg
gtaaccaatgccctgccccacaaggcaaccattgaaaggtctttggataagcgagaggct
gacaaagtatatgtggattatctacaaaataccaggggcaaaagtatggcctggacttat
agtttaaggcctttacccggtgcgccggtgtccacacccctcctatgggaagaaattgag
gagcagagagttctacctggtcattttaatatatcaaccattttccaacgactgaaggta
tttggtgacctgcaccaaagcatgttaaagaacccccaaagcatctctcatattttagat
ttggaataa

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