Dickeya fangzhongdai DSM 101947: CVE23_05320
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Entry
CVE23_05320 CDS
T05277
Name
(GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfn03009
]
CVE23_05320
Enzymes [BR:
dfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
CVE23_05320
Ribosome biogenesis [BR:
dfn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CVE23_05320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
Spt5-NGN
MIT_C
Motif
Other DBs
NCBI-ProteinID:
ATZ93443
UniProt:
A0A2K8QIW3
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All DBs
Position
1148866..1149966
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AA seq
366 aa
AA seq
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MNKVILYCRPGFEKECAAEITDKAARYNVYGFVRVKDNSGYVMFECYQHEDADRLIKELP
FQELIFARQMMVCGELLRDLPPEDRITPIIGMLTGALERAGELRVEVPDTNESKELMKFC
RKFTVPLRAALRENRILLAQEKASRPVIHVLFIAPGCCYVGYSYSNNNSPFYMGIPRLKF
PADAPSRSTLKLEEAFHVFVPADEWDERLSSGMFAVDLGACPGGWTYQLVKRSMMVHAVD
NGMMAPSLMDTGQVIHHQADGFRFEPPRNNIYWLVCDMVEKPAKVTSRMADWLVNGWCRE
VIFNLKLPMKKRYEEVTQNLALLAQRMEENGINFEIHAKHLYHDREEVTVHARRIWGAIP
GRRDER
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtgattttgtactgccgccctggatttgagaaagagtgcgcggcggaaatt
accgacaaggcggcgcgttataacgtctatggctttgtacgggtaaaggataacagcggg
tatgtgatgtttgagtgctaccagcacgaagacgccgatcggctgattaaggaattaccg
ttccaggaactgatatttgcgcgtcagatgatggtatgcggcgaattgttgcgcgatctg
ccgccggaggatcgcatcacgccgatcatcgggatgctgaccggggcgctggagcgcgcc
ggagagctgcgggttgaagtgccggataccaacgaaagcaaggaactgatgaagttctgc
cgcaagttcacggtgccgctgcgcgctgcgctgcgggaaaaccgcatcctgctggcacag
gagaaagccagccgtccggttattcatgtgttgttcatcgctcccggttgctgctatgtc
ggttattcctacagcaataacaattcaccgttctatatggggattccgcggctgaagttc
cctgcggacgccccaagccgctcgacgctgaagctggaagaagcatttcatgtgttcgtg
ccggcggacgaatgggacgaacgcctctccagcggtatgtttgcggtggatctgggcgct
tgccccggcggctggacctatcaactggtgaaacgcagtatgatggttcacgccgtcgat
aacggcatgatggcgccgagcctgatggataccgggcaggtgatccaccatcaggcggac
ggtttccgctttgagccgccgcgtaacaatatctactggctggtgtgcgatatggtggaa
aaaccggccaaagtcaccagccgtatggctgactggctggtcaatggctggtgtcgcgaa
gtgatcttcaaccttaagctaccgatgaaaaagcgctatgaagaagtgacccagaatctg
gccttactggcgcagcggatggaggagaacggcatcaattttgagattcatgccaaacac
ctctatcacgatcgtgaagaagtcaccgttcatgcacggcgtatctggggtgcgattccc
ggccggcgcgacgaacgttga
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